Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26241 | 78946;78947;78948 | chr2:178567411;178567410;178567409 | chr2:179432138;179432137;179432136 |
N2AB | 24600 | 74023;74024;74025 | chr2:178567411;178567410;178567409 | chr2:179432138;179432137;179432136 |
N2A | 23673 | 71242;71243;71244 | chr2:178567411;178567410;178567409 | chr2:179432138;179432137;179432136 |
N2B | 17176 | 51751;51752;51753 | chr2:178567411;178567410;178567409 | chr2:179432138;179432137;179432136 |
Novex-1 | 17301 | 52126;52127;52128 | chr2:178567411;178567410;178567409 | chr2:179432138;179432137;179432136 |
Novex-2 | 17368 | 52327;52328;52329 | chr2:178567411;178567410;178567409 | chr2:179432138;179432137;179432136 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.988 | N | 0.649 | 0.496 | 0.469333501611 | gnomAD-4.0.0 | 6.88882E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02695E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3733 | ambiguous | 0.3309 | benign | -0.778 | Destabilizing | 0.958 | D | 0.481 | neutral | N | 0.495340795 | None | None | N |
E/C | 0.927 | likely_pathogenic | 0.9125 | pathogenic | -0.411 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/D | 0.274 | likely_benign | 0.2194 | benign | -1.163 | Destabilizing | 0.979 | D | 0.375 | neutral | D | 0.525362781 | None | None | N |
E/F | 0.8818 | likely_pathogenic | 0.8528 | pathogenic | -0.093 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
E/G | 0.5125 | ambiguous | 0.4473 | ambiguous | -1.175 | Destabilizing | 0.988 | D | 0.649 | neutral | N | 0.505749276 | None | None | N |
E/H | 0.6605 | likely_pathogenic | 0.6147 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
E/I | 0.4574 | ambiguous | 0.398 | ambiguous | 0.313 | Stabilizing | 0.995 | D | 0.808 | deleterious | None | None | None | None | N |
E/K | 0.362 | ambiguous | 0.33 | benign | -0.441 | Destabilizing | 0.958 | D | 0.432 | neutral | N | 0.504523362 | None | None | N |
E/L | 0.6466 | likely_pathogenic | 0.579 | pathogenic | 0.313 | Stabilizing | 0.991 | D | 0.773 | deleterious | None | None | None | None | N |
E/M | 0.6054 | likely_pathogenic | 0.549 | ambiguous | 0.736 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/N | 0.5098 | ambiguous | 0.4363 | ambiguous | -1.059 | Destabilizing | 0.995 | D | 0.676 | prob.neutral | None | None | None | None | N |
E/P | 0.989 | likely_pathogenic | 0.9869 | pathogenic | -0.029 | Destabilizing | 0.086 | N | 0.33 | neutral | None | None | None | None | N |
E/Q | 0.2171 | likely_benign | 0.1987 | benign | -0.887 | Destabilizing | 0.994 | D | 0.58 | neutral | N | 0.511124047 | None | None | N |
E/R | 0.5555 | ambiguous | 0.5293 | ambiguous | -0.197 | Destabilizing | 0.995 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/S | 0.3854 | ambiguous | 0.3298 | benign | -1.372 | Destabilizing | 0.968 | D | 0.505 | neutral | None | None | None | None | N |
E/T | 0.3532 | ambiguous | 0.2998 | benign | -1.026 | Destabilizing | 0.991 | D | 0.663 | neutral | None | None | None | None | N |
E/V | 0.3089 | likely_benign | 0.2691 | benign | -0.029 | Destabilizing | 0.994 | D | 0.707 | prob.neutral | D | 0.532096752 | None | None | N |
E/W | 0.9691 | likely_pathogenic | 0.9611 | pathogenic | 0.192 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
E/Y | 0.8446 | likely_pathogenic | 0.8119 | pathogenic | 0.191 | Stabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.