Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26248 | 78967;78968;78969 | chr2:178567390;178567389;178567388 | chr2:179432117;179432116;179432115 |
N2AB | 24607 | 74044;74045;74046 | chr2:178567390;178567389;178567388 | chr2:179432117;179432116;179432115 |
N2A | 23680 | 71263;71264;71265 | chr2:178567390;178567389;178567388 | chr2:179432117;179432116;179432115 |
N2B | 17183 | 51772;51773;51774 | chr2:178567390;178567389;178567388 | chr2:179432117;179432116;179432115 |
Novex-1 | 17308 | 52147;52148;52149 | chr2:178567390;178567389;178567388 | chr2:179432117;179432116;179432115 |
Novex-2 | 17375 | 52348;52349;52350 | chr2:178567390;178567389;178567388 | chr2:179432117;179432116;179432115 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1281337813 | -0.587 | 0.901 | N | 0.579 | 0.309 | 0.281780670237 | gnomAD-2.1.1 | 4.23E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.23E-06 | 0 |
K/Q | rs1281337813 | -0.587 | 0.901 | N | 0.579 | 0.309 | 0.281780670237 | gnomAD-4.0.0 | 2.76372E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.71282E-06 | 0 | 1.67527E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3673 | ambiguous | 0.2859 | benign | -0.435 | Destabilizing | 0.415 | N | 0.589 | neutral | None | None | None | None | N |
K/C | 0.5888 | likely_pathogenic | 0.4966 | ambiguous | -0.461 | Destabilizing | 0.996 | D | 0.754 | deleterious | None | None | None | None | N |
K/D | 0.6792 | likely_pathogenic | 0.5888 | pathogenic | -0.315 | Destabilizing | 0.923 | D | 0.651 | neutral | None | None | None | None | N |
K/E | 0.2477 | likely_benign | 0.2078 | benign | -0.224 | Destabilizing | 0.722 | D | 0.495 | neutral | N | 0.471893655 | None | None | N |
K/F | 0.7666 | likely_pathogenic | 0.6709 | pathogenic | -0.227 | Destabilizing | 0.961 | D | 0.748 | deleterious | None | None | None | None | N |
K/G | 0.5486 | ambiguous | 0.4562 | ambiguous | -0.792 | Destabilizing | 0.633 | D | 0.639 | neutral | None | None | None | None | N |
K/H | 0.2084 | likely_benign | 0.1725 | benign | -1.257 | Destabilizing | 0.989 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/I | 0.4434 | ambiguous | 0.3632 | ambiguous | 0.482 | Stabilizing | 0.961 | D | 0.755 | deleterious | None | None | None | None | N |
K/L | 0.3971 | ambiguous | 0.3248 | benign | 0.482 | Stabilizing | 0.775 | D | 0.653 | neutral | None | None | None | None | N |
K/M | 0.2644 | likely_benign | 0.2167 | benign | 0.463 | Stabilizing | 0.995 | D | 0.693 | prob.neutral | N | 0.507278452 | None | None | N |
K/N | 0.4455 | ambiguous | 0.3637 | ambiguous | -0.432 | Destabilizing | 0.722 | D | 0.549 | neutral | N | 0.456964275 | None | None | N |
K/P | 0.9512 | likely_pathogenic | 0.9396 | pathogenic | 0.208 | Stabilizing | 0.961 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/Q | 0.1228 | likely_benign | 0.1061 | benign | -0.553 | Destabilizing | 0.901 | D | 0.579 | neutral | N | 0.478224982 | None | None | N |
K/R | 0.0791 | likely_benign | 0.0743 | benign | -0.626 | Destabilizing | 0.018 | N | 0.257 | neutral | N | 0.435607568 | None | None | N |
K/S | 0.3402 | ambiguous | 0.2602 | benign | -1.024 | Destabilizing | 0.044 | N | 0.206 | neutral | None | None | None | None | N |
K/T | 0.1532 | likely_benign | 0.1171 | benign | -0.736 | Destabilizing | 0.565 | D | 0.619 | neutral | N | 0.429777674 | None | None | N |
K/V | 0.3799 | ambiguous | 0.3061 | benign | 0.208 | Stabilizing | 0.923 | D | 0.657 | neutral | None | None | None | None | N |
K/W | 0.78 | likely_pathogenic | 0.6982 | pathogenic | -0.138 | Destabilizing | 0.996 | D | 0.739 | prob.delet. | None | None | None | None | N |
K/Y | 0.6145 | likely_pathogenic | 0.5214 | ambiguous | 0.182 | Stabilizing | 0.987 | D | 0.735 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.