Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26252 | 78979;78980;78981 | chr2:178567378;178567377;178567376 | chr2:179432105;179432104;179432103 |
N2AB | 24611 | 74056;74057;74058 | chr2:178567378;178567377;178567376 | chr2:179432105;179432104;179432103 |
N2A | 23684 | 71275;71276;71277 | chr2:178567378;178567377;178567376 | chr2:179432105;179432104;179432103 |
N2B | 17187 | 51784;51785;51786 | chr2:178567378;178567377;178567376 | chr2:179432105;179432104;179432103 |
Novex-1 | 17312 | 52159;52160;52161 | chr2:178567378;178567377;178567376 | chr2:179432105;179432104;179432103 |
Novex-2 | 17379 | 52360;52361;52362 | chr2:178567378;178567377;178567376 | chr2:179432105;179432104;179432103 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.013 | N | 0.313 | 0.183 | 0.617987307765 | gnomAD-4.0.0 | 4.85157E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.33639E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2069 | likely_benign | 0.1988 | benign | -2.801 | Highly Destabilizing | 0.103 | N | 0.42 | neutral | None | None | None | None | N |
I/C | 0.5761 | likely_pathogenic | 0.5554 | ambiguous | -1.972 | Destabilizing | 0.965 | D | 0.57 | neutral | None | None | None | None | N |
I/D | 0.6754 | likely_pathogenic | 0.7026 | pathogenic | -3.195 | Highly Destabilizing | 0.561 | D | 0.599 | neutral | None | None | None | None | N |
I/E | 0.5243 | ambiguous | 0.5458 | ambiguous | -2.987 | Highly Destabilizing | 0.561 | D | 0.561 | neutral | None | None | None | None | N |
I/F | 0.1523 | likely_benign | 0.1463 | benign | -1.612 | Destabilizing | 0.772 | D | 0.555 | neutral | D | 0.531115317 | None | None | N |
I/G | 0.6239 | likely_pathogenic | 0.5989 | pathogenic | -3.308 | Highly Destabilizing | 0.39 | N | 0.541 | neutral | None | None | None | None | N |
I/H | 0.3975 | ambiguous | 0.4028 | ambiguous | -2.672 | Highly Destabilizing | 0.991 | D | 0.609 | neutral | None | None | None | None | N |
I/K | 0.4326 | ambiguous | 0.4535 | ambiguous | -2.193 | Highly Destabilizing | 0.561 | D | 0.559 | neutral | None | None | None | None | N |
I/L | 0.1087 | likely_benign | 0.106 | benign | -1.325 | Destabilizing | 0.001 | N | 0.199 | neutral | N | 0.465583758 | None | None | N |
I/M | 0.0886 | likely_benign | 0.0873 | benign | -1.28 | Destabilizing | 0.772 | D | 0.57 | neutral | N | 0.515300503 | None | None | N |
I/N | 0.2621 | likely_benign | 0.268 | benign | -2.48 | Highly Destabilizing | 0.772 | D | 0.599 | neutral | N | 0.497965536 | None | None | N |
I/P | 0.9281 | likely_pathogenic | 0.9254 | pathogenic | -1.801 | Destabilizing | 0.901 | D | 0.597 | neutral | None | None | None | None | N |
I/Q | 0.4113 | ambiguous | 0.4163 | ambiguous | -2.379 | Highly Destabilizing | 0.901 | D | 0.602 | neutral | None | None | None | None | N |
I/R | 0.3191 | likely_benign | 0.3359 | benign | -1.794 | Destabilizing | 0.818 | D | 0.602 | neutral | None | None | None | None | N |
I/S | 0.1895 | likely_benign | 0.1888 | benign | -3.124 | Highly Destabilizing | 0.013 | N | 0.434 | neutral | N | 0.472491088 | None | None | N |
I/T | 0.0841 | likely_benign | 0.086 | benign | -2.792 | Highly Destabilizing | 0.013 | N | 0.313 | neutral | N | 0.429774887 | None | None | N |
I/V | 0.0671 | likely_benign | 0.0654 | benign | -1.801 | Destabilizing | None | N | 0.195 | neutral | N | 0.430759109 | None | None | N |
I/W | 0.6839 | likely_pathogenic | 0.6589 | pathogenic | -2.006 | Highly Destabilizing | 0.991 | D | 0.631 | neutral | None | None | None | None | N |
I/Y | 0.4573 | ambiguous | 0.454 | ambiguous | -1.793 | Destabilizing | 0.901 | D | 0.567 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.