Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26265 | 79018;79019;79020 | chr2:178567339;178567338;178567337 | chr2:179432066;179432065;179432064 |
N2AB | 24624 | 74095;74096;74097 | chr2:178567339;178567338;178567337 | chr2:179432066;179432065;179432064 |
N2A | 23697 | 71314;71315;71316 | chr2:178567339;178567338;178567337 | chr2:179432066;179432065;179432064 |
N2B | 17200 | 51823;51824;51825 | chr2:178567339;178567338;178567337 | chr2:179432066;179432065;179432064 |
Novex-1 | 17325 | 52198;52199;52200 | chr2:178567339;178567338;178567337 | chr2:179432066;179432065;179432064 |
Novex-2 | 17392 | 52399;52400;52401 | chr2:178567339;178567338;178567337 | chr2:179432066;179432065;179432064 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.884 | N | 0.481 | 0.227 | 0.390220360785 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3782 | ambiguous | 0.3324 | benign | -2.349 | Highly Destabilizing | 0.373 | N | 0.505 | neutral | None | None | None | None | N |
I/C | 0.5955 | likely_pathogenic | 0.5307 | ambiguous | -1.64 | Destabilizing | 0.996 | D | 0.544 | neutral | None | None | None | None | N |
I/D | 0.7381 | likely_pathogenic | 0.6788 | pathogenic | -2.487 | Highly Destabilizing | 0.953 | D | 0.621 | neutral | None | None | None | None | N |
I/E | 0.5519 | ambiguous | 0.5084 | ambiguous | -2.275 | Highly Destabilizing | 0.953 | D | 0.608 | neutral | None | None | None | None | N |
I/F | 0.1888 | likely_benign | 0.157 | benign | -1.341 | Destabilizing | 0.884 | D | 0.481 | neutral | N | 0.456906655 | None | None | N |
I/G | 0.7052 | likely_pathogenic | 0.6386 | pathogenic | -2.862 | Highly Destabilizing | 0.854 | D | 0.579 | neutral | None | None | None | None | N |
I/H | 0.4229 | ambiguous | 0.3769 | ambiguous | -2.323 | Highly Destabilizing | 0.996 | D | 0.662 | neutral | None | None | None | None | N |
I/K | 0.4382 | ambiguous | 0.4049 | ambiguous | -1.755 | Destabilizing | 0.91 | D | 0.617 | neutral | None | None | None | None | N |
I/L | 0.1362 | likely_benign | 0.1225 | benign | -0.877 | Destabilizing | 0.164 | N | 0.431 | neutral | N | 0.486760667 | None | None | N |
I/M | 0.1144 | likely_benign | 0.1052 | benign | -0.924 | Destabilizing | 0.939 | D | 0.498 | neutral | N | 0.484221794 | None | None | N |
I/N | 0.2469 | likely_benign | 0.2198 | benign | -2.047 | Highly Destabilizing | 0.939 | D | 0.624 | neutral | N | 0.506386578 | None | None | N |
I/P | 0.9762 | likely_pathogenic | 0.9703 | pathogenic | -1.347 | Destabilizing | 0.984 | D | 0.631 | neutral | None | None | None | None | N |
I/Q | 0.4194 | ambiguous | 0.3801 | ambiguous | -1.915 | Destabilizing | 0.984 | D | 0.659 | neutral | None | None | None | None | N |
I/R | 0.355 | ambiguous | 0.3204 | benign | -1.501 | Destabilizing | 0.953 | D | 0.638 | neutral | None | None | None | None | N |
I/S | 0.2585 | likely_benign | 0.2214 | benign | -2.727 | Highly Destabilizing | 0.521 | D | 0.533 | neutral | N | 0.460747502 | None | None | N |
I/T | 0.1419 | likely_benign | 0.1407 | benign | -2.379 | Highly Destabilizing | 0.012 | N | 0.312 | neutral | N | 0.361735301 | None | None | N |
I/V | 0.0729 | likely_benign | 0.0703 | benign | -1.347 | Destabilizing | 0.003 | N | 0.196 | neutral | N | 0.415476572 | None | None | N |
I/W | 0.809 | likely_pathogenic | 0.7685 | pathogenic | -1.709 | Destabilizing | 0.996 | D | 0.705 | prob.neutral | None | None | None | None | N |
I/Y | 0.479 | ambiguous | 0.4245 | ambiguous | -1.413 | Destabilizing | 0.953 | D | 0.537 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.