Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2630 | 8113;8114;8115 | chr2:178771439;178771438;178771437 | chr2:179636166;179636165;179636164 |
N2AB | 2630 | 8113;8114;8115 | chr2:178771439;178771438;178771437 | chr2:179636166;179636165;179636164 |
N2A | 2630 | 8113;8114;8115 | chr2:178771439;178771438;178771437 | chr2:179636166;179636165;179636164 |
N2B | 2584 | 7975;7976;7977 | chr2:178771439;178771438;178771437 | chr2:179636166;179636165;179636164 |
Novex-1 | 2584 | 7975;7976;7977 | chr2:178771439;178771438;178771437 | chr2:179636166;179636165;179636164 |
Novex-2 | 2584 | 7975;7976;7977 | chr2:178771439;178771438;178771437 | chr2:179636166;179636165;179636164 |
Novex-3 | 2630 | 8113;8114;8115 | chr2:178771439;178771438;178771437 | chr2:179636166;179636165;179636164 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs2091468969 | None | 0.374 | N | 0.319 | 0.211 | 0.251116650651 | gnomAD-4.0.0 | 1.59105E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41429E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1309 | likely_benign | 0.1363 | benign | -0.466 | Destabilizing | 0.76 | D | 0.411 | neutral | D | 0.547333665 | None | None | N |
T/C | 0.6498 | likely_pathogenic | 0.6527 | pathogenic | -0.395 | Destabilizing | 0.999 | D | 0.536 | neutral | None | None | None | None | N |
T/D | 0.4638 | ambiguous | 0.4673 | ambiguous | 0.03 | Stabilizing | 0.986 | D | 0.491 | neutral | None | None | None | None | N |
T/E | 0.3367 | likely_benign | 0.3358 | benign | -0.011 | Destabilizing | 0.986 | D | 0.482 | neutral | None | None | None | None | N |
T/F | 0.3128 | likely_benign | 0.3346 | benign | -0.706 | Destabilizing | 0.986 | D | 0.617 | neutral | None | None | None | None | N |
T/G | 0.5153 | ambiguous | 0.5383 | ambiguous | -0.665 | Destabilizing | 0.953 | D | 0.467 | neutral | None | None | None | None | N |
T/H | 0.3278 | likely_benign | 0.3268 | benign | -0.923 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
T/I | 0.1313 | likely_benign | 0.1407 | benign | -0.049 | Destabilizing | 0.1 | N | 0.26 | neutral | N | 0.507601806 | None | None | N |
T/K | 0.2497 | likely_benign | 0.235 | benign | -0.605 | Destabilizing | 0.986 | D | 0.489 | neutral | None | None | None | None | N |
T/L | 0.127 | likely_benign | 0.1346 | benign | -0.049 | Destabilizing | 0.91 | D | 0.404 | neutral | None | None | None | None | N |
T/M | 0.0913 | likely_benign | 0.0973 | benign | 0.041 | Stabilizing | 0.996 | D | 0.531 | neutral | None | None | None | None | N |
T/N | 0.1614 | likely_benign | 0.1689 | benign | -0.442 | Destabilizing | 0.982 | D | 0.447 | neutral | D | 0.531735319 | None | None | N |
T/P | 0.4046 | ambiguous | 0.3799 | ambiguous | -0.156 | Destabilizing | 0.991 | D | 0.545 | neutral | D | 0.652907407 | None | None | N |
T/Q | 0.2928 | likely_benign | 0.2925 | benign | -0.619 | Destabilizing | 0.993 | D | 0.535 | neutral | None | None | None | None | N |
T/R | 0.2273 | likely_benign | 0.2114 | benign | -0.332 | Destabilizing | 0.993 | D | 0.541 | neutral | None | None | None | None | N |
T/S | 0.1828 | likely_benign | 0.196 | benign | -0.667 | Destabilizing | 0.374 | N | 0.319 | neutral | N | 0.50917363 | None | None | N |
T/V | 0.1151 | likely_benign | 0.1233 | benign | -0.156 | Destabilizing | 0.91 | D | 0.386 | neutral | None | None | None | None | N |
T/W | 0.6758 | likely_pathogenic | 0.6793 | pathogenic | -0.694 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
T/Y | 0.388 | ambiguous | 0.3898 | ambiguous | -0.441 | Destabilizing | 0.998 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.