Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26312 | 79159;79160;79161 | chr2:178567198;178567197;178567196 | chr2:179431925;179431924;179431923 |
N2AB | 24671 | 74236;74237;74238 | chr2:178567198;178567197;178567196 | chr2:179431925;179431924;179431923 |
N2A | 23744 | 71455;71456;71457 | chr2:178567198;178567197;178567196 | chr2:179431925;179431924;179431923 |
N2B | 17247 | 51964;51965;51966 | chr2:178567198;178567197;178567196 | chr2:179431925;179431924;179431923 |
Novex-1 | 17372 | 52339;52340;52341 | chr2:178567198;178567197;178567196 | chr2:179431925;179431924;179431923 |
Novex-2 | 17439 | 52540;52541;52542 | chr2:178567198;178567197;178567196 | chr2:179431925;179431924;179431923 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | None | None | 0.003 | N | 0.193 | 0.046 | 0.16115917748 | gnomAD-4.0.0 | 1.59337E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86231E-06 | 0 | 0 |
L/P | None | None | 0.662 | N | 0.382 | 0.18 | 0.62999039529 | gnomAD-4.0.0 | 2.73845E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59956E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1055 | likely_benign | 0.1146 | benign | -0.389 | Destabilizing | 0.007 | N | 0.149 | neutral | None | None | None | None | N |
L/C | 0.395 | ambiguous | 0.3939 | ambiguous | -0.563 | Destabilizing | 0.991 | D | 0.273 | neutral | None | None | None | None | N |
L/D | 0.4804 | ambiguous | 0.4606 | ambiguous | -0.207 | Destabilizing | 0.39 | N | 0.377 | neutral | None | None | None | None | N |
L/E | 0.1816 | likely_benign | 0.1686 | benign | -0.314 | Destabilizing | 0.002 | N | 0.2 | neutral | None | None | None | None | N |
L/F | 0.1413 | likely_benign | 0.1414 | benign | -0.564 | Destabilizing | 0.772 | D | 0.283 | neutral | N | 0.488218819 | None | None | N |
L/G | 0.2814 | likely_benign | 0.2861 | benign | -0.509 | Destabilizing | 0.345 | N | 0.34 | neutral | None | None | None | None | N |
L/H | 0.159 | likely_benign | 0.1606 | benign | 0.09 | Stabilizing | 0.873 | D | 0.262 | neutral | N | 0.49579673 | None | None | N |
L/I | 0.0892 | likely_benign | 0.0912 | benign | -0.205 | Destabilizing | 0.003 | N | 0.193 | neutral | N | 0.490217552 | None | None | N |
L/K | 0.1153 | likely_benign | 0.1242 | benign | -0.221 | Destabilizing | 0.209 | N | 0.258 | neutral | None | None | None | None | N |
L/M | 0.0998 | likely_benign | 0.1029 | benign | -0.38 | Destabilizing | 0.818 | D | 0.3 | neutral | None | None | None | None | N |
L/N | 0.243 | likely_benign | 0.2522 | benign | 0.008 | Stabilizing | 0.561 | D | 0.419 | neutral | None | None | None | None | N |
L/P | 0.2431 | likely_benign | 0.2395 | benign | -0.235 | Destabilizing | 0.662 | D | 0.382 | neutral | N | 0.496834093 | None | None | N |
L/Q | 0.0755 | likely_benign | 0.0748 | benign | -0.225 | Destabilizing | 0.017 | N | 0.197 | neutral | None | None | None | None | N |
L/R | 0.1135 | likely_benign | 0.1114 | benign | 0.287 | Stabilizing | 0.001 | N | 0.148 | neutral | N | 0.46478039 | None | None | N |
L/S | 0.1302 | likely_benign | 0.1317 | benign | -0.373 | Destabilizing | 0.209 | N | 0.281 | neutral | None | None | None | None | N |
L/T | 0.1257 | likely_benign | 0.1352 | benign | -0.378 | Destabilizing | 0.345 | N | 0.311 | neutral | None | None | None | None | N |
L/V | 0.0793 | likely_benign | 0.0795 | benign | -0.235 | Destabilizing | 0.166 | N | 0.211 | neutral | N | 0.454411467 | None | None | N |
L/W | 0.2673 | likely_benign | 0.2352 | benign | -0.589 | Destabilizing | 0.991 | D | 0.251 | neutral | None | None | None | None | N |
L/Y | 0.2899 | likely_benign | 0.2783 | benign | -0.324 | Destabilizing | 0.965 | D | 0.33 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.