Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26320 | 79183;79184;79185 | chr2:178567174;178567173;178567172 | chr2:179431901;179431900;179431899 |
N2AB | 24679 | 74260;74261;74262 | chr2:178567174;178567173;178567172 | chr2:179431901;179431900;179431899 |
N2A | 23752 | 71479;71480;71481 | chr2:178567174;178567173;178567172 | chr2:179431901;179431900;179431899 |
N2B | 17255 | 51988;51989;51990 | chr2:178567174;178567173;178567172 | chr2:179431901;179431900;179431899 |
Novex-1 | 17380 | 52363;52364;52365 | chr2:178567174;178567173;178567172 | chr2:179431901;179431900;179431899 |
Novex-2 | 17447 | 52564;52565;52566 | chr2:178567174;178567173;178567172 | chr2:179431901;179431900;179431899 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.999 | N | 0.706 | 0.47 | 0.504789117978 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1304 | likely_benign | 0.1202 | benign | -0.528 | Destabilizing | 0.773 | D | 0.431 | neutral | N | 0.467254181 | None | None | I |
S/C | 0.1579 | likely_benign | 0.1456 | benign | -0.349 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | N | 0.477422399 | None | None | I |
S/D | 0.6448 | likely_pathogenic | 0.5617 | ambiguous | -0.113 | Destabilizing | 0.916 | D | 0.507 | neutral | None | None | None | None | I |
S/E | 0.726 | likely_pathogenic | 0.6686 | pathogenic | -0.12 | Destabilizing | 0.845 | D | 0.469 | neutral | None | None | None | None | I |
S/F | 0.3118 | likely_benign | 0.278 | benign | -0.668 | Destabilizing | 0.994 | D | 0.765 | deleterious | N | 0.495019675 | None | None | I |
S/G | 0.1586 | likely_benign | 0.1579 | benign | -0.78 | Destabilizing | 0.916 | D | 0.469 | neutral | None | None | None | None | I |
S/H | 0.5314 | ambiguous | 0.48 | ambiguous | -1.274 | Destabilizing | 0.997 | D | 0.717 | prob.delet. | None | None | None | None | I |
S/I | 0.2418 | likely_benign | 0.2116 | benign | 0.029 | Stabilizing | 0.987 | D | 0.778 | deleterious | None | None | None | None | I |
S/K | 0.8301 | likely_pathogenic | 0.7761 | pathogenic | -0.729 | Destabilizing | 0.845 | D | 0.471 | neutral | None | None | None | None | I |
S/L | 0.1092 | likely_benign | 0.1082 | benign | 0.029 | Stabilizing | 0.916 | D | 0.653 | neutral | None | None | None | None | I |
S/M | 0.2074 | likely_benign | 0.1979 | benign | 0.192 | Stabilizing | 0.997 | D | 0.717 | prob.delet. | None | None | None | None | I |
S/N | 0.243 | likely_benign | 0.2445 | benign | -0.628 | Destabilizing | 0.916 | D | 0.53 | neutral | None | None | None | None | I |
S/P | 0.8697 | likely_pathogenic | 0.8476 | pathogenic | -0.122 | Destabilizing | 0.983 | D | 0.746 | deleterious | N | 0.506882959 | None | None | I |
S/Q | 0.6488 | likely_pathogenic | 0.614 | pathogenic | -0.729 | Destabilizing | 0.253 | N | 0.207 | neutral | None | None | None | None | I |
S/R | 0.8053 | likely_pathogenic | 0.7499 | pathogenic | -0.646 | Destabilizing | 0.95 | D | 0.673 | neutral | None | None | None | None | I |
S/T | 0.0651 | likely_benign | 0.0629 | benign | -0.618 | Destabilizing | 0.892 | D | 0.455 | neutral | N | 0.37756405 | None | None | I |
S/V | 0.2554 | likely_benign | 0.2259 | benign | -0.122 | Destabilizing | 0.975 | D | 0.654 | neutral | None | None | None | None | I |
S/W | 0.5727 | likely_pathogenic | 0.4853 | ambiguous | -0.703 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | I |
S/Y | 0.3338 | likely_benign | 0.2847 | benign | -0.433 | Destabilizing | 0.994 | D | 0.77 | deleterious | N | 0.488525215 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.