Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26324 | 79195;79196;79197 | chr2:178567162;178567161;178567160 | chr2:179431889;179431888;179431887 |
N2AB | 24683 | 74272;74273;74274 | chr2:178567162;178567161;178567160 | chr2:179431889;179431888;179431887 |
N2A | 23756 | 71491;71492;71493 | chr2:178567162;178567161;178567160 | chr2:179431889;179431888;179431887 |
N2B | 17259 | 52000;52001;52002 | chr2:178567162;178567161;178567160 | chr2:179431889;179431888;179431887 |
Novex-1 | 17384 | 52375;52376;52377 | chr2:178567162;178567161;178567160 | chr2:179431889;179431888;179431887 |
Novex-2 | 17451 | 52576;52577;52578 | chr2:178567162;178567161;178567160 | chr2:179431889;179431888;179431887 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs747655927 | -0.716 | 0.006 | N | 0.153 | 0.073 | 0.386721274199 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs747655927 | -0.716 | 0.006 | N | 0.153 | 0.073 | 0.386721274199 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs747655927 | -0.716 | 0.006 | N | 0.153 | 0.073 | 0.386721274199 | gnomAD-4.0.0 | 6.57358E-06 | None | None | None | None | N | None | 2.41336E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7517 | likely_pathogenic | 0.7634 | pathogenic | -2.39 | Highly Destabilizing | 0.656 | D | 0.57 | neutral | D | 0.533577221 | None | None | N |
V/C | 0.966 | likely_pathogenic | 0.9703 | pathogenic | -1.928 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
V/D | 0.9992 | likely_pathogenic | 0.9993 | pathogenic | -3.473 | Highly Destabilizing | 0.99 | D | 0.865 | deleterious | D | 0.560835736 | None | None | N |
V/E | 0.9971 | likely_pathogenic | 0.9971 | pathogenic | -3.15 | Highly Destabilizing | 0.978 | D | 0.804 | deleterious | None | None | None | None | N |
V/F | 0.9133 | likely_pathogenic | 0.9335 | pathogenic | -1.384 | Destabilizing | 0.942 | D | 0.709 | prob.delet. | D | 0.560582246 | None | None | N |
V/G | 0.9575 | likely_pathogenic | 0.9578 | pathogenic | -3.015 | Highly Destabilizing | 0.97 | D | 0.832 | deleterious | D | 0.560835736 | None | None | N |
V/H | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -2.927 | Highly Destabilizing | 0.998 | D | 0.869 | deleterious | None | None | None | None | N |
V/I | 0.0776 | likely_benign | 0.0792 | benign | -0.574 | Destabilizing | 0.006 | N | 0.153 | neutral | N | 0.455339761 | None | None | N |
V/K | 0.9978 | likely_pathogenic | 0.9981 | pathogenic | -2.097 | Highly Destabilizing | 0.978 | D | 0.807 | deleterious | None | None | None | None | N |
V/L | 0.4848 | ambiguous | 0.5212 | ambiguous | -0.574 | Destabilizing | 0.006 | N | 0.295 | neutral | N | 0.506099442 | None | None | N |
V/M | 0.6837 | likely_pathogenic | 0.7376 | pathogenic | -0.792 | Destabilizing | 0.956 | D | 0.629 | neutral | None | None | None | None | N |
V/N | 0.9975 | likely_pathogenic | 0.9978 | pathogenic | -2.788 | Highly Destabilizing | 0.993 | D | 0.869 | deleterious | None | None | None | None | N |
V/P | 0.9952 | likely_pathogenic | 0.9941 | pathogenic | -1.159 | Destabilizing | 0.993 | D | 0.843 | deleterious | None | None | None | None | N |
V/Q | 0.9964 | likely_pathogenic | 0.9968 | pathogenic | -2.434 | Highly Destabilizing | 0.993 | D | 0.865 | deleterious | None | None | None | None | N |
V/R | 0.9955 | likely_pathogenic | 0.9958 | pathogenic | -2.15 | Highly Destabilizing | 0.978 | D | 0.868 | deleterious | None | None | None | None | N |
V/S | 0.9762 | likely_pathogenic | 0.9787 | pathogenic | -3.323 | Highly Destabilizing | 0.978 | D | 0.761 | deleterious | None | None | None | None | N |
V/T | 0.8592 | likely_pathogenic | 0.8674 | pathogenic | -2.836 | Highly Destabilizing | 0.86 | D | 0.583 | neutral | None | None | None | None | N |
V/W | 0.9986 | likely_pathogenic | 0.9989 | pathogenic | -2.006 | Highly Destabilizing | 0.998 | D | 0.849 | deleterious | None | None | None | None | N |
V/Y | 0.9957 | likely_pathogenic | 0.9964 | pathogenic | -1.645 | Destabilizing | 0.978 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.