Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26329 | 79210;79211;79212 | chr2:178567147;178567146;178567145 | chr2:179431874;179431873;179431872 |
N2AB | 24688 | 74287;74288;74289 | chr2:178567147;178567146;178567145 | chr2:179431874;179431873;179431872 |
N2A | 23761 | 71506;71507;71508 | chr2:178567147;178567146;178567145 | chr2:179431874;179431873;179431872 |
N2B | 17264 | 52015;52016;52017 | chr2:178567147;178567146;178567145 | chr2:179431874;179431873;179431872 |
Novex-1 | 17389 | 52390;52391;52392 | chr2:178567147;178567146;178567145 | chr2:179431874;179431873;179431872 |
Novex-2 | 17456 | 52591;52592;52593 | chr2:178567147;178567146;178567145 | chr2:179431874;179431873;179431872 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1443062175 | -0.985 | 0.825 | N | 0.534 | 0.325 | 0.201204373187 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
T/A | rs1443062175 | -0.985 | 0.825 | N | 0.534 | 0.325 | 0.201204373187 | gnomAD-4.0.0 | 1.36865E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79919E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.4867 | ambiguous | 0.4923 | ambiguous | -0.671 | Destabilizing | 0.825 | D | 0.534 | neutral | N | 0.514401134 | None | None | N |
T/C | 0.9356 | likely_pathogenic | 0.9422 | pathogenic | -0.464 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
T/D | 0.9589 | likely_pathogenic | 0.9513 | pathogenic | 0.059 | Stabilizing | 0.991 | D | 0.579 | neutral | None | None | None | None | N |
T/E | 0.9554 | likely_pathogenic | 0.9418 | pathogenic | 0.034 | Stabilizing | 0.991 | D | 0.575 | neutral | None | None | None | None | N |
T/F | 0.9631 | likely_pathogenic | 0.9597 | pathogenic | -0.81 | Destabilizing | 0.995 | D | 0.716 | prob.delet. | None | None | None | None | N |
T/G | 0.8039 | likely_pathogenic | 0.7791 | pathogenic | -0.895 | Destabilizing | 0.938 | D | 0.59 | neutral | None | None | None | None | N |
T/H | 0.9468 | likely_pathogenic | 0.9408 | pathogenic | -1.119 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/I | 0.8897 | likely_pathogenic | 0.8865 | pathogenic | -0.177 | Destabilizing | 0.994 | D | 0.669 | neutral | N | 0.466862561 | None | None | N |
T/K | 0.91 | likely_pathogenic | 0.8815 | pathogenic | -0.645 | Destabilizing | 0.991 | D | 0.58 | neutral | None | None | None | None | N |
T/L | 0.6513 | likely_pathogenic | 0.649 | pathogenic | -0.177 | Destabilizing | 0.968 | D | 0.544 | neutral | None | None | None | None | N |
T/M | 0.4443 | ambiguous | 0.4496 | ambiguous | 0.02 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
T/N | 0.7147 | likely_pathogenic | 0.6737 | pathogenic | -0.496 | Destabilizing | 0.988 | D | 0.636 | neutral | N | 0.471648727 | None | None | N |
T/P | 0.8566 | likely_pathogenic | 0.8135 | pathogenic | -0.31 | Destabilizing | 0.994 | D | 0.659 | neutral | N | 0.516692077 | None | None | N |
T/Q | 0.9184 | likely_pathogenic | 0.8984 | pathogenic | -0.685 | Destabilizing | 0.991 | D | 0.674 | neutral | None | None | None | None | N |
T/R | 0.8973 | likely_pathogenic | 0.8758 | pathogenic | -0.371 | Destabilizing | 0.991 | D | 0.65 | neutral | None | None | None | None | N |
T/S | 0.4352 | ambiguous | 0.4223 | ambiguous | -0.794 | Destabilizing | 0.234 | N | 0.302 | neutral | N | 0.484945018 | None | None | N |
T/V | 0.7145 | likely_pathogenic | 0.7163 | pathogenic | -0.31 | Destabilizing | 0.968 | D | 0.567 | neutral | None | None | None | None | N |
T/W | 0.9912 | likely_pathogenic | 0.9898 | pathogenic | -0.735 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
T/Y | 0.9627 | likely_pathogenic | 0.9581 | pathogenic | -0.508 | Destabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.