Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26349 | 79270;79271;79272 | chr2:178567087;178567086;178567085 | chr2:179431814;179431813;179431812 |
N2AB | 24708 | 74347;74348;74349 | chr2:178567087;178567086;178567085 | chr2:179431814;179431813;179431812 |
N2A | 23781 | 71566;71567;71568 | chr2:178567087;178567086;178567085 | chr2:179431814;179431813;179431812 |
N2B | 17284 | 52075;52076;52077 | chr2:178567087;178567086;178567085 | chr2:179431814;179431813;179431812 |
Novex-1 | 17409 | 52450;52451;52452 | chr2:178567087;178567086;178567085 | chr2:179431814;179431813;179431812 |
Novex-2 | 17476 | 52651;52652;52653 | chr2:178567087;178567086;178567085 | chr2:179431814;179431813;179431812 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.928 | N | 0.43 | 0.36 | 0.319970858106 | gnomAD-4.0.0 | 3.601E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62502E-06 | 0 | 3.66354E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1719 | likely_benign | 0.1776 | benign | -0.483 | Destabilizing | 0.928 | D | 0.43 | neutral | N | 0.517713585 | None | None | N |
T/C | 0.5567 | ambiguous | 0.544 | ambiguous | -0.355 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
T/D | 0.782 | likely_pathogenic | 0.7817 | pathogenic | 0.279 | Stabilizing | 0.997 | D | 0.748 | deleterious | None | None | None | None | N |
T/E | 0.7407 | likely_pathogenic | 0.7016 | pathogenic | 0.254 | Stabilizing | 0.997 | D | 0.745 | deleterious | None | None | None | None | N |
T/F | 0.4993 | ambiguous | 0.4493 | ambiguous | -0.665 | Destabilizing | 0.983 | D | 0.79 | deleterious | None | None | None | None | N |
T/G | 0.2838 | likely_benign | 0.2874 | benign | -0.694 | Destabilizing | 0.992 | D | 0.671 | neutral | None | None | None | None | N |
T/H | 0.5282 | ambiguous | 0.5042 | ambiguous | -0.861 | Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | N |
T/I | 0.4471 | ambiguous | 0.4105 | ambiguous | -0.03 | Destabilizing | 0.085 | N | 0.261 | neutral | N | 0.492060841 | None | None | N |
T/K | 0.6143 | likely_pathogenic | 0.5585 | ambiguous | -0.494 | Destabilizing | 0.992 | D | 0.749 | deleterious | None | None | None | None | N |
T/L | 0.1864 | likely_benign | 0.1686 | benign | -0.03 | Destabilizing | 0.745 | D | 0.487 | neutral | None | None | None | None | N |
T/M | 0.1409 | likely_benign | 0.1377 | benign | -0.014 | Destabilizing | 0.996 | D | 0.771 | deleterious | None | None | None | None | N |
T/N | 0.2216 | likely_benign | 0.2277 | benign | -0.346 | Destabilizing | 0.996 | D | 0.651 | neutral | N | 0.520791175 | None | None | N |
T/P | 0.1901 | likely_benign | 0.2325 | benign | -0.149 | Destabilizing | 0.996 | D | 0.781 | deleterious | N | 0.47020715 | None | None | N |
T/Q | 0.4493 | ambiguous | 0.4233 | ambiguous | -0.48 | Destabilizing | 0.997 | D | 0.787 | deleterious | None | None | None | None | N |
T/R | 0.588 | likely_pathogenic | 0.5286 | ambiguous | -0.248 | Destabilizing | 0.997 | D | 0.782 | deleterious | None | None | None | None | N |
T/S | 0.1548 | likely_benign | 0.1619 | benign | -0.622 | Destabilizing | 0.963 | D | 0.407 | neutral | N | 0.484291657 | None | None | N |
T/V | 0.2933 | likely_benign | 0.2665 | benign | -0.149 | Destabilizing | 0.547 | D | 0.444 | neutral | None | None | None | None | N |
T/W | 0.8106 | likely_pathogenic | 0.752 | pathogenic | -0.656 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
T/Y | 0.6037 | likely_pathogenic | 0.5332 | ambiguous | -0.4 | Destabilizing | 0.992 | D | 0.793 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.