Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26378 | 79357;79358;79359 | chr2:178567000;178566999;178566998 | chr2:179431727;179431726;179431725 |
N2AB | 24737 | 74434;74435;74436 | chr2:178567000;178566999;178566998 | chr2:179431727;179431726;179431725 |
N2A | 23810 | 71653;71654;71655 | chr2:178567000;178566999;178566998 | chr2:179431727;179431726;179431725 |
N2B | 17313 | 52162;52163;52164 | chr2:178567000;178566999;178566998 | chr2:179431727;179431726;179431725 |
Novex-1 | 17438 | 52537;52538;52539 | chr2:178567000;178566999;178566998 | chr2:179431727;179431726;179431725 |
Novex-2 | 17505 | 52738;52739;52740 | chr2:178567000;178566999;178566998 | chr2:179431727;179431726;179431725 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1476994621 | -0.547 | 0.994 | N | 0.693 | 0.241 | 0.354822389136 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
V/I | rs1476994621 | -0.547 | 0.994 | N | 0.693 | 0.241 | 0.354822389136 | gnomAD-4.0.0 | 1.36855E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99551E-07 | 1.15934E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4084 | ambiguous | 0.392 | ambiguous | -1.723 | Destabilizing | 0.997 | D | 0.717 | prob.delet. | N | 0.507902782 | None | None | I |
V/C | 0.7606 | likely_pathogenic | 0.7482 | pathogenic | -1.016 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
V/D | 0.9296 | likely_pathogenic | 0.9231 | pathogenic | -2.165 | Highly Destabilizing | 0.999 | D | 0.899 | deleterious | None | None | None | None | I |
V/E | 0.7589 | likely_pathogenic | 0.7393 | pathogenic | -1.996 | Destabilizing | 0.999 | D | 0.885 | deleterious | N | 0.520944608 | None | None | I |
V/F | 0.3178 | likely_benign | 0.2935 | benign | -1.068 | Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | I |
V/G | 0.6678 | likely_pathogenic | 0.6496 | pathogenic | -2.19 | Highly Destabilizing | 0.999 | D | 0.847 | deleterious | N | 0.520944608 | None | None | I |
V/H | 0.8722 | likely_pathogenic | 0.8586 | pathogenic | -1.821 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | I |
V/I | 0.0788 | likely_benign | 0.0762 | benign | -0.452 | Destabilizing | 0.994 | D | 0.693 | prob.delet. | N | 0.458563707 | None | None | I |
V/K | 0.7653 | likely_pathogenic | 0.7702 | pathogenic | -1.496 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | I |
V/L | 0.2336 | likely_benign | 0.2166 | benign | -0.452 | Destabilizing | 0.994 | D | 0.692 | prob.delet. | N | 0.476921284 | None | None | I |
V/M | 0.1741 | likely_benign | 0.1697 | benign | -0.312 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | I |
V/N | 0.8057 | likely_pathogenic | 0.7835 | pathogenic | -1.678 | Destabilizing | 0.999 | D | 0.901 | deleterious | None | None | None | None | I |
V/P | 0.9858 | likely_pathogenic | 0.981 | pathogenic | -0.847 | Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | I |
V/Q | 0.6569 | likely_pathogenic | 0.6415 | pathogenic | -1.617 | Destabilizing | 0.999 | D | 0.903 | deleterious | None | None | None | None | I |
V/R | 0.7285 | likely_pathogenic | 0.7331 | pathogenic | -1.206 | Destabilizing | 0.999 | D | 0.9 | deleterious | None | None | None | None | I |
V/S | 0.6106 | likely_pathogenic | 0.5883 | pathogenic | -2.231 | Highly Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | I |
V/T | 0.3485 | ambiguous | 0.3406 | ambiguous | -1.931 | Destabilizing | 0.998 | D | 0.744 | deleterious | None | None | None | None | I |
V/W | 0.9537 | likely_pathogenic | 0.9416 | pathogenic | -1.537 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
V/Y | 0.8025 | likely_pathogenic | 0.7868 | pathogenic | -1.114 | Destabilizing | 0.999 | D | 0.867 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.