Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26397 | 79414;79415;79416 | chr2:178566943;178566942;178566941 | chr2:179431670;179431669;179431668 |
N2AB | 24756 | 74491;74492;74493 | chr2:178566943;178566942;178566941 | chr2:179431670;179431669;179431668 |
N2A | 23829 | 71710;71711;71712 | chr2:178566943;178566942;178566941 | chr2:179431670;179431669;179431668 |
N2B | 17332 | 52219;52220;52221 | chr2:178566943;178566942;178566941 | chr2:179431670;179431669;179431668 |
Novex-1 | 17457 | 52594;52595;52596 | chr2:178566943;178566942;178566941 | chr2:179431670;179431669;179431668 |
Novex-2 | 17524 | 52795;52796;52797 | chr2:178566943;178566942;178566941 | chr2:179431670;179431669;179431668 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1349397397 | None | 0.958 | N | 0.434 | 0.399 | 0.256283259241 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2671 | likely_benign | 0.2718 | benign | -0.354 | Destabilizing | 0.938 | D | 0.503 | neutral | None | None | None | None | N |
N/C | 0.3515 | ambiguous | 0.325 | benign | 0.357 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
N/D | 0.4383 | ambiguous | 0.3889 | ambiguous | 0.127 | Stabilizing | 0.958 | D | 0.434 | neutral | N | 0.428032943 | None | None | N |
N/E | 0.8017 | likely_pathogenic | 0.7685 | pathogenic | 0.09 | Stabilizing | 0.938 | D | 0.445 | neutral | None | None | None | None | N |
N/F | 0.7818 | likely_pathogenic | 0.7635 | pathogenic | -0.724 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
N/G | 0.32 | likely_benign | 0.3146 | benign | -0.524 | Destabilizing | 0.968 | D | 0.407 | neutral | None | None | None | None | N |
N/H | 0.1878 | likely_benign | 0.1897 | benign | -0.556 | Destabilizing | 0.994 | D | 0.613 | neutral | N | 0.480157877 | None | None | N |
N/I | 0.6213 | likely_pathogenic | 0.5972 | pathogenic | 0.006 | Stabilizing | 0.994 | D | 0.707 | prob.neutral | N | 0.486260717 | None | None | N |
N/K | 0.7949 | likely_pathogenic | 0.7751 | pathogenic | 0.146 | Stabilizing | 0.067 | N | 0.288 | neutral | N | 0.473133301 | None | None | N |
N/L | 0.446 | ambiguous | 0.447 | ambiguous | 0.006 | Stabilizing | 0.991 | D | 0.643 | neutral | None | None | None | None | N |
N/M | 0.5278 | ambiguous | 0.5209 | ambiguous | 0.393 | Stabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
N/P | 0.9522 | likely_pathogenic | 0.9459 | pathogenic | -0.088 | Destabilizing | 0.995 | D | 0.649 | neutral | None | None | None | None | N |
N/Q | 0.605 | likely_pathogenic | 0.6071 | pathogenic | -0.337 | Destabilizing | 0.991 | D | 0.631 | neutral | None | None | None | None | N |
N/R | 0.7639 | likely_pathogenic | 0.7456 | pathogenic | 0.204 | Stabilizing | 0.982 | D | 0.539 | neutral | None | None | None | None | N |
N/S | 0.0893 | likely_benign | 0.0878 | benign | -0.102 | Destabilizing | 0.958 | D | 0.389 | neutral | N | 0.445349267 | None | None | N |
N/T | 0.24 | likely_benign | 0.2325 | benign | 0.005 | Stabilizing | 0.958 | D | 0.482 | neutral | N | 0.495047369 | None | None | N |
N/V | 0.4425 | ambiguous | 0.4195 | ambiguous | -0.088 | Destabilizing | 0.991 | D | 0.7 | prob.neutral | None | None | None | None | N |
N/W | 0.9301 | likely_pathogenic | 0.9184 | pathogenic | -0.689 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
N/Y | 0.39 | ambiguous | 0.367 | ambiguous | -0.424 | Destabilizing | 0.998 | D | 0.649 | neutral | N | 0.494147529 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.