Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26410 | 79453;79454;79455 | chr2:178566904;178566903;178566902 | chr2:179431631;179431630;179431629 |
N2AB | 24769 | 74530;74531;74532 | chr2:178566904;178566903;178566902 | chr2:179431631;179431630;179431629 |
N2A | 23842 | 71749;71750;71751 | chr2:178566904;178566903;178566902 | chr2:179431631;179431630;179431629 |
N2B | 17345 | 52258;52259;52260 | chr2:178566904;178566903;178566902 | chr2:179431631;179431630;179431629 |
Novex-1 | 17470 | 52633;52634;52635 | chr2:178566904;178566903;178566902 | chr2:179431631;179431630;179431629 |
Novex-2 | 17537 | 52834;52835;52836 | chr2:178566904;178566903;178566902 | chr2:179431631;179431630;179431629 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 1.0 | D | 0.889 | 0.736 | 0.669250944419 | gnomAD-4.0.0 | 1.59173E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02554E-05 |
P/S | None | None | 1.0 | D | 0.861 | 0.68 | 0.581534369529 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9469 | likely_pathogenic | 0.9145 | pathogenic | -1.979 | Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.58972279 | None | None | N |
P/C | 0.9951 | likely_pathogenic | 0.9918 | pathogenic | -1.324 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
P/D | 0.9992 | likely_pathogenic | 0.9985 | pathogenic | -2.253 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
P/E | 0.9985 | likely_pathogenic | 0.9967 | pathogenic | -2.18 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
P/F | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -1.445 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
P/G | 0.9939 | likely_pathogenic | 0.9897 | pathogenic | -2.393 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
P/H | 0.9979 | likely_pathogenic | 0.9957 | pathogenic | -2.067 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
P/I | 0.9966 | likely_pathogenic | 0.9949 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
P/K | 0.9992 | likely_pathogenic | 0.9983 | pathogenic | -1.722 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
P/L | 0.983 | likely_pathogenic | 0.9746 | pathogenic | -0.892 | Destabilizing | 1.0 | D | 0.901 | deleterious | D | 0.627858513 | None | None | N |
P/M | 0.9971 | likely_pathogenic | 0.9956 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
P/N | 0.999 | likely_pathogenic | 0.9981 | pathogenic | -1.616 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/Q | 0.9976 | likely_pathogenic | 0.995 | pathogenic | -1.7 | Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.623759912 | None | None | N |
P/R | 0.9975 | likely_pathogenic | 0.9946 | pathogenic | -1.256 | Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.601270301 | None | None | N |
P/S | 0.9903 | likely_pathogenic | 0.9816 | pathogenic | -2.147 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | D | 0.578175278 | None | None | N |
P/T | 0.9848 | likely_pathogenic | 0.9724 | pathogenic | -1.957 | Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.61917734 | None | None | N |
P/V | 0.9884 | likely_pathogenic | 0.9842 | pathogenic | -1.223 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
P/W | 0.9998 | likely_pathogenic | 0.9996 | pathogenic | -1.783 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
P/Y | 0.9997 | likely_pathogenic | 0.9994 | pathogenic | -1.487 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.