Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26447 | 79564;79565;79566 | chr2:178566793;178566792;178566791 | chr2:179431520;179431519;179431518 |
N2AB | 24806 | 74641;74642;74643 | chr2:178566793;178566792;178566791 | chr2:179431520;179431519;179431518 |
N2A | 23879 | 71860;71861;71862 | chr2:178566793;178566792;178566791 | chr2:179431520;179431519;179431518 |
N2B | 17382 | 52369;52370;52371 | chr2:178566793;178566792;178566791 | chr2:179431520;179431519;179431518 |
Novex-1 | 17507 | 52744;52745;52746 | chr2:178566793;178566792;178566791 | chr2:179431520;179431519;179431518 |
Novex-2 | 17574 | 52945;52946;52947 | chr2:178566793;178566792;178566791 | chr2:179431520;179431519;179431518 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.892 | N | 0.637 | 0.358 | 0.539567288477 | gnomAD-4.0.0 | 1.59217E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77624E-05 | None | 0 | 0 | 0 | 0 | 0 |
R/K | None | None | 0.025 | N | 0.308 | 0.143 | 0.202086224978 | gnomAD-4.0.0 | 4.77661E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71762E-06 | 0 | 3.02572E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9654 | likely_pathogenic | 0.9718 | pathogenic | -0.521 | Destabilizing | 0.845 | D | 0.61 | neutral | None | None | None | None | N |
R/C | 0.7485 | likely_pathogenic | 0.7733 | pathogenic | -0.471 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
R/D | 0.9903 | likely_pathogenic | 0.9932 | pathogenic | -0.104 | Destabilizing | 0.975 | D | 0.694 | prob.neutral | None | None | None | None | N |
R/E | 0.9534 | likely_pathogenic | 0.9635 | pathogenic | -0.037 | Destabilizing | 0.845 | D | 0.561 | neutral | None | None | None | None | N |
R/F | 0.9747 | likely_pathogenic | 0.979 | pathogenic | -0.719 | Destabilizing | 0.996 | D | 0.713 | prob.delet. | None | None | None | None | N |
R/G | 0.9475 | likely_pathogenic | 0.9582 | pathogenic | -0.747 | Destabilizing | 0.892 | D | 0.637 | neutral | N | 0.494664053 | None | None | N |
R/H | 0.4887 | ambiguous | 0.538 | ambiguous | -1.133 | Destabilizing | 0.987 | D | 0.647 | neutral | None | None | None | None | N |
R/I | 0.9057 | likely_pathogenic | 0.9196 | pathogenic | 0.054 | Stabilizing | 0.983 | D | 0.718 | prob.delet. | N | 0.472152025 | None | None | N |
R/K | 0.2812 | likely_benign | 0.3321 | benign | -0.515 | Destabilizing | 0.025 | N | 0.308 | neutral | N | 0.442154246 | None | None | N |
R/L | 0.8354 | likely_pathogenic | 0.8563 | pathogenic | 0.054 | Stabilizing | 0.916 | D | 0.637 | neutral | None | None | None | None | N |
R/M | 0.9109 | likely_pathogenic | 0.921 | pathogenic | -0.116 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
R/N | 0.9841 | likely_pathogenic | 0.9874 | pathogenic | -0.001 | Destabilizing | 0.975 | D | 0.631 | neutral | None | None | None | None | N |
R/P | 0.967 | likely_pathogenic | 0.9741 | pathogenic | -0.117 | Destabilizing | 0.987 | D | 0.715 | prob.delet. | None | None | None | None | N |
R/Q | 0.5348 | ambiguous | 0.5723 | pathogenic | -0.263 | Destabilizing | 0.975 | D | 0.629 | neutral | None | None | None | None | N |
R/S | 0.9811 | likely_pathogenic | 0.9857 | pathogenic | -0.638 | Destabilizing | 0.892 | D | 0.659 | neutral | N | 0.520076312 | None | None | N |
R/T | 0.9328 | likely_pathogenic | 0.9542 | pathogenic | -0.424 | Destabilizing | 0.967 | D | 0.683 | prob.neutral | N | 0.453096385 | None | None | N |
R/V | 0.9181 | likely_pathogenic | 0.9335 | pathogenic | -0.117 | Destabilizing | 0.975 | D | 0.719 | prob.delet. | None | None | None | None | N |
R/W | 0.7132 | likely_pathogenic | 0.7408 | pathogenic | -0.549 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | None | None | None | None | N |
R/Y | 0.9271 | likely_pathogenic | 0.9334 | pathogenic | -0.182 | Destabilizing | 0.996 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.