Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26456 | 79591;79592;79593 | chr2:178566766;178566765;178566764 | chr2:179431493;179431492;179431491 |
N2AB | 24815 | 74668;74669;74670 | chr2:178566766;178566765;178566764 | chr2:179431493;179431492;179431491 |
N2A | 23888 | 71887;71888;71889 | chr2:178566766;178566765;178566764 | chr2:179431493;179431492;179431491 |
N2B | 17391 | 52396;52397;52398 | chr2:178566766;178566765;178566764 | chr2:179431493;179431492;179431491 |
Novex-1 | 17516 | 52771;52772;52773 | chr2:178566766;178566765;178566764 | chr2:179431493;179431492;179431491 |
Novex-2 | 17583 | 52972;52973;52974 | chr2:178566766;178566765;178566764 | chr2:179431493;179431492;179431491 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs767070836 | -1.446 | 0.994 | N | 0.561 | 0.535 | 0.479518371956 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 0 | 0 |
E/A | rs767070836 | -1.446 | 0.994 | N | 0.561 | 0.535 | 0.479518371956 | gnomAD-4.0.0 | 1.11453E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.00301E-04 | 0 |
E/K | rs1706025148 | None | 0.989 | N | 0.462 | 0.334 | 0.4018988957 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1706025148 | None | 0.989 | N | 0.462 | 0.334 | 0.4018988957 | gnomAD-4.0.0 | 1.5225E-05 | None | None | None | None | N | None | 6.98983E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.32544E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2539 | likely_benign | 0.232 | benign | -1.048 | Destabilizing | 0.994 | D | 0.561 | neutral | N | 0.482777997 | None | None | N |
E/C | 0.853 | likely_pathogenic | 0.8164 | pathogenic | -0.551 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/D | 0.1556 | likely_benign | 0.1423 | benign | -1.383 | Destabilizing | 0.217 | N | 0.197 | neutral | N | 0.474864731 | None | None | N |
E/F | 0.6961 | likely_pathogenic | 0.6726 | pathogenic | -0.407 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
E/G | 0.4051 | ambiguous | 0.3882 | ambiguous | -1.495 | Destabilizing | 0.989 | D | 0.635 | neutral | N | 0.491603088 | None | None | N |
E/H | 0.6029 | likely_pathogenic | 0.5714 | pathogenic | -0.679 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
E/I | 0.4341 | ambiguous | 0.4084 | ambiguous | 0.211 | Stabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
E/K | 0.439 | ambiguous | 0.4311 | ambiguous | -1.143 | Destabilizing | 0.989 | D | 0.462 | neutral | N | 0.467912518 | None | None | N |
E/L | 0.4467 | ambiguous | 0.4498 | ambiguous | 0.211 | Stabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | N |
E/M | 0.4888 | ambiguous | 0.4641 | ambiguous | 0.907 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/N | 0.3816 | ambiguous | 0.3254 | benign | -1.57 | Destabilizing | 0.784 | D | 0.247 | neutral | None | None | None | None | N |
E/P | 0.8712 | likely_pathogenic | 0.8847 | pathogenic | -0.189 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/Q | 0.2287 | likely_benign | 0.2102 | benign | -1.315 | Destabilizing | 0.998 | D | 0.603 | neutral | N | 0.467938971 | None | None | N |
E/R | 0.5938 | likely_pathogenic | 0.578 | pathogenic | -0.915 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
E/S | 0.2806 | likely_benign | 0.2419 | benign | -2.118 | Highly Destabilizing | 0.992 | D | 0.451 | neutral | None | None | None | None | N |
E/T | 0.3241 | likely_benign | 0.2924 | benign | -1.726 | Destabilizing | 0.992 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/V | 0.2977 | likely_benign | 0.2794 | benign | -0.189 | Destabilizing | 0.999 | D | 0.777 | deleterious | N | 0.477866926 | None | None | N |
E/W | 0.9088 | likely_pathogenic | 0.8971 | pathogenic | -0.28 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/Y | 0.6214 | likely_pathogenic | 0.5756 | pathogenic | -0.171 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.