Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26458 | 79597;79598;79599 | chr2:178566760;178566759;178566758 | chr2:179431487;179431486;179431485 |
N2AB | 24817 | 74674;74675;74676 | chr2:178566760;178566759;178566758 | chr2:179431487;179431486;179431485 |
N2A | 23890 | 71893;71894;71895 | chr2:178566760;178566759;178566758 | chr2:179431487;179431486;179431485 |
N2B | 17393 | 52402;52403;52404 | chr2:178566760;178566759;178566758 | chr2:179431487;179431486;179431485 |
Novex-1 | 17518 | 52777;52778;52779 | chr2:178566760;178566759;178566758 | chr2:179431487;179431486;179431485 |
Novex-2 | 17585 | 52978;52979;52980 | chr2:178566760;178566759;178566758 | chr2:179431487;179431486;179431485 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1162274016 | -1.475 | 0.958 | N | 0.598 | 0.303 | 0.210429274316 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1162274016 | -1.475 | 0.958 | N | 0.598 | 0.303 | 0.210429274316 | gnomAD-4.0.0 | 1.59216E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77546E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5652 | likely_pathogenic | 0.5219 | ambiguous | -0.782 | Destabilizing | 0.958 | D | 0.631 | neutral | N | 0.497110043 | None | None | N |
E/C | 0.9412 | likely_pathogenic | 0.9332 | pathogenic | -0.065 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/D | 0.8688 | likely_pathogenic | 0.8641 | pathogenic | -1.566 | Destabilizing | 0.958 | D | 0.598 | neutral | N | 0.506593471 | None | None | N |
E/F | 0.9741 | likely_pathogenic | 0.9738 | pathogenic | -0.454 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
E/G | 0.8288 | likely_pathogenic | 0.7886 | pathogenic | -1.193 | Destabilizing | 0.988 | D | 0.719 | prob.delet. | D | 0.533345006 | None | None | N |
E/H | 0.9309 | likely_pathogenic | 0.9278 | pathogenic | -0.408 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/I | 0.8487 | likely_pathogenic | 0.8606 | pathogenic | 0.393 | Stabilizing | 0.995 | D | 0.834 | deleterious | None | None | None | None | N |
E/K | 0.8611 | likely_pathogenic | 0.8648 | pathogenic | -0.782 | Destabilizing | 0.919 | D | 0.603 | neutral | N | 0.478067509 | None | None | N |
E/L | 0.9179 | likely_pathogenic | 0.9279 | pathogenic | 0.393 | Stabilizing | 0.991 | D | 0.754 | deleterious | None | None | None | None | N |
E/M | 0.8199 | likely_pathogenic | 0.8127 | pathogenic | 1.016 | Stabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
E/N | 0.9251 | likely_pathogenic | 0.9191 | pathogenic | -1.16 | Destabilizing | 0.991 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/P | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | 0.017 | Stabilizing | 0.995 | D | 0.76 | deleterious | None | None | None | None | N |
E/Q | 0.3031 | likely_benign | 0.2991 | benign | -0.798 | Destabilizing | 0.414 | N | 0.389 | neutral | N | 0.511382258 | None | None | N |
E/R | 0.8927 | likely_pathogenic | 0.8956 | pathogenic | -0.806 | Destabilizing | 0.982 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/S | 0.6901 | likely_pathogenic | 0.6333 | pathogenic | -1.711 | Destabilizing | 0.968 | D | 0.635 | neutral | None | None | None | None | N |
E/T | 0.8231 | likely_pathogenic | 0.8206 | pathogenic | -1.311 | Destabilizing | 0.991 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/V | 0.74 | likely_pathogenic | 0.7501 | pathogenic | 0.017 | Stabilizing | 0.988 | D | 0.736 | prob.delet. | N | 0.48473978 | None | None | N |
E/W | 0.9961 | likely_pathogenic | 0.9959 | pathogenic | -0.655 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
E/Y | 0.9682 | likely_pathogenic | 0.9662 | pathogenic | -0.275 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.