Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26479 | 79660;79661;79662 | chr2:178566697;178566696;178566695 | chr2:179431424;179431423;179431422 |
N2AB | 24838 | 74737;74738;74739 | chr2:178566697;178566696;178566695 | chr2:179431424;179431423;179431422 |
N2A | 23911 | 71956;71957;71958 | chr2:178566697;178566696;178566695 | chr2:179431424;179431423;179431422 |
N2B | 17414 | 52465;52466;52467 | chr2:178566697;178566696;178566695 | chr2:179431424;179431423;179431422 |
Novex-1 | 17539 | 52840;52841;52842 | chr2:178566697;178566696;178566695 | chr2:179431424;179431423;179431422 |
Novex-2 | 17606 | 53041;53042;53043 | chr2:178566697;178566696;178566695 | chr2:179431424;179431423;179431422 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.993 | N | 0.508 | 0.263 | 0.601923037437 | gnomAD-4.0.0 | 1.59216E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85896E-06 | 0 | 0 |
Y/F | rs747150576 | -0.485 | 0.002 | N | 0.187 | 0.163 | 0.294918367191 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/F | rs747150576 | -0.485 | 0.002 | N | 0.187 | 0.163 | 0.294918367191 | gnomAD-4.0.0 | 1.59216E-06 | None | None | None | None | I | None | 5.65803E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.4306 | ambiguous | 0.4037 | ambiguous | -2.367 | Highly Destabilizing | 0.834 | D | 0.545 | neutral | None | None | None | None | I |
Y/C | 0.1074 | likely_benign | 0.081 | benign | -1.356 | Destabilizing | 0.993 | D | 0.508 | neutral | N | 0.485163718 | None | None | I |
Y/D | 0.6589 | likely_pathogenic | 0.5876 | pathogenic | -1.756 | Destabilizing | 0.976 | D | 0.561 | neutral | N | 0.485163718 | None | None | I |
Y/E | 0.7368 | likely_pathogenic | 0.6888 | pathogenic | -1.612 | Destabilizing | 0.982 | D | 0.578 | neutral | None | None | None | None | I |
Y/F | 0.0867 | likely_benign | 0.0743 | benign | -0.91 | Destabilizing | 0.002 | N | 0.187 | neutral | N | 0.503911994 | None | None | I |
Y/G | 0.5393 | ambiguous | 0.4954 | ambiguous | -2.718 | Highly Destabilizing | 0.834 | D | 0.611 | neutral | None | None | None | None | I |
Y/H | 0.2049 | likely_benign | 0.1623 | benign | -1.111 | Destabilizing | 0.976 | D | 0.547 | neutral | N | 0.473553923 | None | None | I |
Y/I | 0.3336 | likely_benign | 0.2835 | benign | -1.259 | Destabilizing | 0.553 | D | 0.527 | neutral | None | None | None | None | I |
Y/K | 0.6563 | likely_pathogenic | 0.611 | pathogenic | -1.736 | Destabilizing | 0.982 | D | 0.592 | neutral | None | None | None | None | I |
Y/L | 0.3868 | ambiguous | 0.3594 | ambiguous | -1.259 | Destabilizing | 0.003 | N | 0.186 | neutral | None | None | None | None | I |
Y/M | 0.5092 | ambiguous | 0.4706 | ambiguous | -1.017 | Destabilizing | 0.897 | D | 0.567 | neutral | None | None | None | None | I |
Y/N | 0.3836 | ambiguous | 0.3022 | benign | -2.354 | Highly Destabilizing | 0.976 | D | 0.583 | neutral | N | 0.484910228 | None | None | I |
Y/P | 0.9444 | likely_pathogenic | 0.9371 | pathogenic | -1.631 | Destabilizing | 0.982 | D | 0.529 | neutral | None | None | None | None | I |
Y/Q | 0.4378 | ambiguous | 0.3746 | ambiguous | -2.149 | Highly Destabilizing | 0.982 | D | 0.601 | neutral | None | None | None | None | I |
Y/R | 0.466 | ambiguous | 0.406 | ambiguous | -1.453 | Destabilizing | 0.982 | D | 0.575 | neutral | None | None | None | None | I |
Y/S | 0.251 | likely_benign | 0.2205 | benign | -2.789 | Highly Destabilizing | 0.791 | D | 0.605 | neutral | N | 0.48389627 | None | None | I |
Y/T | 0.3635 | ambiguous | 0.3243 | benign | -2.536 | Highly Destabilizing | 0.834 | D | 0.589 | neutral | None | None | None | None | I |
Y/V | 0.2388 | likely_benign | 0.2133 | benign | -1.631 | Destabilizing | 0.338 | N | 0.511 | neutral | None | None | None | None | I |
Y/W | 0.4274 | ambiguous | 0.3439 | ambiguous | -0.42 | Destabilizing | 0.018 | N | 0.241 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.