Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26488 | 79687;79688;79689 | chr2:178566670;178566669;178566668 | chr2:179431397;179431396;179431395 |
N2AB | 24847 | 74764;74765;74766 | chr2:178566670;178566669;178566668 | chr2:179431397;179431396;179431395 |
N2A | 23920 | 71983;71984;71985 | chr2:178566670;178566669;178566668 | chr2:179431397;179431396;179431395 |
N2B | 17423 | 52492;52493;52494 | chr2:178566670;178566669;178566668 | chr2:179431397;179431396;179431395 |
Novex-1 | 17548 | 52867;52868;52869 | chr2:178566670;178566669;178566668 | chr2:179431397;179431396;179431395 |
Novex-2 | 17615 | 53068;53069;53070 | chr2:178566670;178566669;178566668 | chr2:179431397;179431396;179431395 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | D | 0.837 | 0.706 | 0.908644682553 | gnomAD-4.0.0 | 1.36894E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79906E-06 | 0 | 0 |
P/S | None | None | 1.0 | D | 0.776 | 0.737 | 0.677927297446 | gnomAD-4.0.0 | 1.59263E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85886E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.8229 | likely_pathogenic | 0.685 | pathogenic | -1.88 | Destabilizing | 0.999 | D | 0.824 | deleterious | D | 0.602509693 | None | None | N |
P/C | 0.9911 | likely_pathogenic | 0.9855 | pathogenic | -2.008 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
P/D | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -3.245 | Highly Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
P/E | 0.998 | likely_pathogenic | 0.9968 | pathogenic | -3.14 | Highly Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
P/F | 0.9997 | likely_pathogenic | 0.9993 | pathogenic | -1.184 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
P/G | 0.9911 | likely_pathogenic | 0.9863 | pathogenic | -2.255 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
P/H | 0.9983 | likely_pathogenic | 0.9972 | pathogenic | -1.726 | Destabilizing | 1.0 | D | 0.803 | deleterious | D | 0.648155048 | None | None | N |
P/I | 0.9918 | likely_pathogenic | 0.9857 | pathogenic | -0.873 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
P/K | 0.999 | likely_pathogenic | 0.9984 | pathogenic | -1.633 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
P/L | 0.9719 | likely_pathogenic | 0.9503 | pathogenic | -0.873 | Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.646944222 | None | None | N |
P/M | 0.9955 | likely_pathogenic | 0.9925 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
P/N | 0.999 | likely_pathogenic | 0.9985 | pathogenic | -1.931 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
P/Q | 0.9969 | likely_pathogenic | 0.9949 | pathogenic | -1.995 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
P/R | 0.9964 | likely_pathogenic | 0.9946 | pathogenic | -1.234 | Destabilizing | 1.0 | D | 0.853 | deleterious | D | 0.647953244 | None | None | N |
P/S | 0.9852 | likely_pathogenic | 0.9707 | pathogenic | -2.345 | Highly Destabilizing | 1.0 | D | 0.776 | deleterious | D | 0.622011523 | None | None | N |
P/T | 0.9794 | likely_pathogenic | 0.9611 | pathogenic | -2.133 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | D | 0.647953244 | None | None | N |
P/V | 0.972 | likely_pathogenic | 0.9552 | pathogenic | -1.183 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
P/W | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -1.574 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
P/Y | 0.9995 | likely_pathogenic | 0.9991 | pathogenic | -1.284 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.