Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2649 | 8170;8171;8172 | chr2:178771382;178771381;178771380 | chr2:179636109;179636108;179636107 |
N2AB | 2649 | 8170;8171;8172 | chr2:178771382;178771381;178771380 | chr2:179636109;179636108;179636107 |
N2A | 2649 | 8170;8171;8172 | chr2:178771382;178771381;178771380 | chr2:179636109;179636108;179636107 |
N2B | 2603 | 8032;8033;8034 | chr2:178771382;178771381;178771380 | chr2:179636109;179636108;179636107 |
Novex-1 | 2603 | 8032;8033;8034 | chr2:178771382;178771381;178771380 | chr2:179636109;179636108;179636107 |
Novex-2 | 2603 | 8032;8033;8034 | chr2:178771382;178771381;178771380 | chr2:179636109;179636108;179636107 |
Novex-3 | 2649 | 8170;8171;8172 | chr2:178771382;178771381;178771380 | chr2:179636109;179636108;179636107 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs769037510 | 0.197 | None | N | 0.107 | 0.096 | 0.194818534648 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.8E-06 | 0 |
K/R | rs745433704 | 0.227 | 0.012 | N | 0.319 | 0.11 | 0.381746406553 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.45E-05 | None | 0 | None | 0 | 0 | 0 |
K/R | rs745433704 | 0.227 | 0.012 | N | 0.319 | 0.11 | 0.381746406553 | gnomAD-4.0.0 | 4.78879E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.04134E-05 | None | 0 | 0 | 4.4967E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1344 | likely_benign | 0.1306 | benign | -0.072 | Destabilizing | 0.007 | N | 0.232 | neutral | None | None | None | None | N |
K/C | 0.5743 | likely_pathogenic | 0.5316 | ambiguous | -0.525 | Destabilizing | 0.864 | D | 0.335 | neutral | None | None | None | None | N |
K/D | 0.1664 | likely_benign | 0.1757 | benign | -0.291 | Destabilizing | 0.016 | N | 0.265 | neutral | None | None | None | None | N |
K/E | 0.067 | likely_benign | 0.0704 | benign | -0.318 | Destabilizing | None | N | 0.107 | neutral | N | 0.445992301 | None | None | N |
K/F | 0.5556 | ambiguous | 0.5435 | ambiguous | -0.478 | Destabilizing | 0.214 | N | 0.389 | neutral | None | None | None | None | N |
K/G | 0.2105 | likely_benign | 0.2209 | benign | -0.157 | Destabilizing | 0.016 | N | 0.343 | neutral | None | None | None | None | N |
K/H | 0.2156 | likely_benign | 0.2074 | benign | -0.252 | Destabilizing | 0.214 | N | 0.377 | neutral | None | None | None | None | N |
K/I | 0.1842 | likely_benign | 0.169 | benign | 0.071 | Stabilizing | 0.029 | N | 0.455 | neutral | D | 0.549341633 | None | None | N |
K/L | 0.2007 | likely_benign | 0.1902 | benign | 0.071 | Stabilizing | None | N | 0.261 | neutral | None | None | None | None | N |
K/M | 0.1729 | likely_benign | 0.161 | benign | -0.173 | Destabilizing | 0.214 | N | 0.377 | neutral | None | None | None | None | N |
K/N | 0.1454 | likely_benign | 0.1515 | benign | -0.065 | Destabilizing | 0.029 | N | 0.287 | neutral | N | 0.499443682 | None | None | N |
K/P | 0.2689 | likely_benign | 0.2533 | benign | 0.044 | Stabilizing | 0.136 | N | 0.42 | neutral | None | None | None | None | N |
K/Q | 0.0986 | likely_benign | 0.1015 | benign | -0.206 | Destabilizing | None | N | 0.176 | neutral | N | 0.504380746 | None | None | N |
K/R | 0.0943 | likely_benign | 0.0941 | benign | -0.194 | Destabilizing | 0.012 | N | 0.319 | neutral | N | 0.513623843 | None | None | N |
K/S | 0.1463 | likely_benign | 0.1447 | benign | -0.427 | Destabilizing | None | N | 0.156 | neutral | None | None | None | None | N |
K/T | 0.0902 | likely_benign | 0.0867 | benign | -0.353 | Destabilizing | 0.012 | N | 0.326 | neutral | N | 0.490625743 | None | None | N |
K/V | 0.1627 | likely_benign | 0.1534 | benign | 0.044 | Stabilizing | 0.016 | N | 0.362 | neutral | None | None | None | None | N |
K/W | 0.6617 | likely_pathogenic | 0.6612 | pathogenic | -0.585 | Destabilizing | 0.864 | D | 0.34 | neutral | None | None | None | None | N |
K/Y | 0.4041 | ambiguous | 0.4038 | ambiguous | -0.243 | Destabilizing | 0.356 | N | 0.425 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.