Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26497 | 79714;79715;79716 | chr2:178566643;178566642;178566641 | chr2:179431370;179431369;179431368 |
N2AB | 24856 | 74791;74792;74793 | chr2:178566643;178566642;178566641 | chr2:179431370;179431369;179431368 |
N2A | 23929 | 72010;72011;72012 | chr2:178566643;178566642;178566641 | chr2:179431370;179431369;179431368 |
N2B | 17432 | 52519;52520;52521 | chr2:178566643;178566642;178566641 | chr2:179431370;179431369;179431368 |
Novex-1 | 17557 | 52894;52895;52896 | chr2:178566643;178566642;178566641 | chr2:179431370;179431369;179431368 |
Novex-2 | 17624 | 53095;53096;53097 | chr2:178566643;178566642;178566641 | chr2:179431370;179431369;179431368 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.001 | N | 0.221 | 0.036 | 0.37262878642 | gnomAD-4.0.0 | 1.5934E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76735E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1274 | likely_benign | 0.1045 | benign | -1.097 | Destabilizing | 0.001 | N | 0.16 | neutral | N | 0.479115124 | None | None | N |
V/C | 0.6655 | likely_pathogenic | 0.5868 | pathogenic | -0.635 | Destabilizing | 0.944 | D | 0.487 | neutral | None | None | None | None | N |
V/D | 0.4394 | ambiguous | 0.3817 | ambiguous | -1.059 | Destabilizing | 0.69 | D | 0.569 | neutral | None | None | None | None | N |
V/E | 0.309 | likely_benign | 0.262 | benign | -1.138 | Destabilizing | 0.627 | D | 0.494 | neutral | N | 0.464068314 | None | None | N |
V/F | 0.1796 | likely_benign | 0.1519 | benign | -1.087 | Destabilizing | 0.69 | D | 0.5 | neutral | None | None | None | None | N |
V/G | 0.2561 | likely_benign | 0.1939 | benign | -1.316 | Destabilizing | 0.193 | N | 0.501 | neutral | N | 0.466279903 | None | None | N |
V/H | 0.5577 | ambiguous | 0.4686 | ambiguous | -0.872 | Destabilizing | 0.981 | D | 0.571 | neutral | None | None | None | None | N |
V/I | 0.0652 | likely_benign | 0.0642 | benign | -0.631 | Destabilizing | 0.001 | N | 0.221 | neutral | N | 0.47580546 | None | None | N |
V/K | 0.4019 | ambiguous | 0.324 | benign | -1.006 | Destabilizing | 0.69 | D | 0.488 | neutral | None | None | None | None | N |
V/L | 0.1326 | likely_benign | 0.1123 | benign | -0.631 | Destabilizing | 0.001 | N | 0.157 | neutral | N | 0.456584981 | None | None | N |
V/M | 0.1091 | likely_benign | 0.0962 | benign | -0.388 | Destabilizing | 0.69 | D | 0.471 | neutral | None | None | None | None | N |
V/N | 0.3066 | likely_benign | 0.2433 | benign | -0.656 | Destabilizing | 0.818 | D | 0.573 | neutral | None | None | None | None | N |
V/P | 0.7466 | likely_pathogenic | 0.6448 | pathogenic | -0.751 | Destabilizing | 0.818 | D | 0.565 | neutral | None | None | None | None | N |
V/Q | 0.3306 | likely_benign | 0.2609 | benign | -0.921 | Destabilizing | 0.818 | D | 0.558 | neutral | None | None | None | None | N |
V/R | 0.3705 | ambiguous | 0.2917 | benign | -0.371 | Destabilizing | 0.69 | D | 0.573 | neutral | None | None | None | None | N |
V/S | 0.1796 | likely_benign | 0.1448 | benign | -1.032 | Destabilizing | 0.241 | N | 0.495 | neutral | None | None | None | None | N |
V/T | 0.0984 | likely_benign | 0.0859 | benign | -1.016 | Destabilizing | 0.008 | N | 0.213 | neutral | None | None | None | None | N |
V/W | 0.7621 | likely_pathogenic | 0.6737 | pathogenic | -1.207 | Destabilizing | 0.981 | D | 0.667 | neutral | None | None | None | None | N |
V/Y | 0.5384 | ambiguous | 0.4622 | ambiguous | -0.944 | Destabilizing | 0.818 | D | 0.5 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.