Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26524 | 79795;79796;79797 | chr2:178566562;178566561;178566560 | chr2:179431289;179431288;179431287 |
N2AB | 24883 | 74872;74873;74874 | chr2:178566562;178566561;178566560 | chr2:179431289;179431288;179431287 |
N2A | 23956 | 72091;72092;72093 | chr2:178566562;178566561;178566560 | chr2:179431289;179431288;179431287 |
N2B | 17459 | 52600;52601;52602 | chr2:178566562;178566561;178566560 | chr2:179431289;179431288;179431287 |
Novex-1 | 17584 | 52975;52976;52977 | chr2:178566562;178566561;178566560 | chr2:179431289;179431288;179431287 |
Novex-2 | 17651 | 53176;53177;53178 | chr2:178566562;178566561;178566560 | chr2:179431289;179431288;179431287 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.834 | D | 0.645 | 0.49 | 0.752298016129 | gnomAD-4.0.0 | 1.59276E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
V/L | rs1705941525 | None | 0.263 | N | 0.621 | 0.109 | 0.547426921019 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/L | rs1705941525 | None | 0.263 | N | 0.621 | 0.109 | 0.547426921019 | gnomAD-4.0.0 | 6.57635E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47098E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5241 | ambiguous | 0.5279 | ambiguous | -2.153 | Highly Destabilizing | 0.834 | D | 0.645 | neutral | D | 0.546908536 | None | None | N |
V/C | 0.9274 | likely_pathogenic | 0.9334 | pathogenic | -1.628 | Destabilizing | 0.998 | D | 0.842 | deleterious | None | None | None | None | N |
V/D | 0.9969 | likely_pathogenic | 0.9968 | pathogenic | -3.345 | Highly Destabilizing | 0.979 | D | 0.888 | deleterious | None | None | None | None | N |
V/E | 0.9901 | likely_pathogenic | 0.9898 | pathogenic | -3.018 | Highly Destabilizing | 0.973 | D | 0.887 | deleterious | D | 0.55902531 | None | None | N |
V/F | 0.7397 | likely_pathogenic | 0.7252 | pathogenic | -1.292 | Destabilizing | 0.959 | D | 0.861 | deleterious | None | None | None | None | N |
V/G | 0.8841 | likely_pathogenic | 0.8805 | pathogenic | -2.761 | Highly Destabilizing | 0.973 | D | 0.883 | deleterious | D | 0.55902531 | None | None | N |
V/H | 0.9965 | likely_pathogenic | 0.9963 | pathogenic | -2.789 | Highly Destabilizing | 0.998 | D | 0.879 | deleterious | None | None | None | None | N |
V/I | 0.0781 | likely_benign | 0.0782 | benign | -0.377 | Destabilizing | 0.016 | N | 0.317 | neutral | N | 0.488740259 | None | None | N |
V/K | 0.9911 | likely_pathogenic | 0.991 | pathogenic | -1.868 | Destabilizing | 0.979 | D | 0.887 | deleterious | None | None | None | None | N |
V/L | 0.3064 | likely_benign | 0.3038 | benign | -0.377 | Destabilizing | 0.263 | N | 0.621 | neutral | N | 0.503944572 | None | None | N |
V/M | 0.3744 | ambiguous | 0.3652 | ambiguous | -0.617 | Destabilizing | 0.959 | D | 0.791 | deleterious | None | None | None | None | N |
V/N | 0.9884 | likely_pathogenic | 0.988 | pathogenic | -2.624 | Highly Destabilizing | 0.993 | D | 0.889 | deleterious | None | None | None | None | N |
V/P | 0.9838 | likely_pathogenic | 0.9815 | pathogenic | -0.951 | Destabilizing | 0.993 | D | 0.888 | deleterious | None | None | None | None | N |
V/Q | 0.9869 | likely_pathogenic | 0.9871 | pathogenic | -2.237 | Highly Destabilizing | 0.993 | D | 0.899 | deleterious | None | None | None | None | N |
V/R | 0.9847 | likely_pathogenic | 0.9859 | pathogenic | -2.059 | Highly Destabilizing | 0.979 | D | 0.894 | deleterious | None | None | None | None | N |
V/S | 0.9185 | likely_pathogenic | 0.9212 | pathogenic | -3.08 | Highly Destabilizing | 0.979 | D | 0.891 | deleterious | None | None | None | None | N |
V/T | 0.6551 | likely_pathogenic | 0.6536 | pathogenic | -2.586 | Highly Destabilizing | 0.87 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/W | 0.9942 | likely_pathogenic | 0.9946 | pathogenic | -1.89 | Destabilizing | 0.998 | D | 0.863 | deleterious | None | None | None | None | N |
V/Y | 0.9827 | likely_pathogenic | 0.9824 | pathogenic | -1.521 | Destabilizing | 0.979 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.