Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26529 | 79810;79811;79812 | chr2:178566547;178566546;178566545 | chr2:179431274;179431273;179431272 |
N2AB | 24888 | 74887;74888;74889 | chr2:178566547;178566546;178566545 | chr2:179431274;179431273;179431272 |
N2A | 23961 | 72106;72107;72108 | chr2:178566547;178566546;178566545 | chr2:179431274;179431273;179431272 |
N2B | 17464 | 52615;52616;52617 | chr2:178566547;178566546;178566545 | chr2:179431274;179431273;179431272 |
Novex-1 | 17589 | 52990;52991;52992 | chr2:178566547;178566546;178566545 | chr2:179431274;179431273;179431272 |
Novex-2 | 17656 | 53191;53192;53193 | chr2:178566547;178566546;178566545 | chr2:179431274;179431273;179431272 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.822 | N | 0.545 | 0.225 | 0.304108284078 | gnomAD-4.0.0 | 4.10648E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49757E-06 | 0 | 1.65695E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5017 | ambiguous | 0.5323 | ambiguous | -0.998 | Destabilizing | 0.998 | D | 0.579 | neutral | None | None | None | None | N |
A/D | 0.2375 | likely_benign | 0.2496 | benign | -1.715 | Destabilizing | 0.915 | D | 0.555 | neutral | None | None | None | None | N |
A/E | 0.1969 | likely_benign | 0.2086 | benign | -1.799 | Destabilizing | 0.032 | N | 0.33 | neutral | N | 0.458662494 | None | None | N |
A/F | 0.408 | ambiguous | 0.4234 | ambiguous | -1.358 | Destabilizing | 0.956 | D | 0.633 | neutral | None | None | None | None | N |
A/G | 0.1127 | likely_benign | 0.1207 | benign | -1.278 | Destabilizing | 0.014 | N | 0.323 | neutral | N | 0.454200824 | None | None | N |
A/H | 0.5234 | ambiguous | 0.5551 | ambiguous | -1.257 | Destabilizing | 0.994 | D | 0.627 | neutral | None | None | None | None | N |
A/I | 0.1891 | likely_benign | 0.1954 | benign | -0.732 | Destabilizing | 0.915 | D | 0.507 | neutral | None | None | None | None | N |
A/K | 0.3641 | ambiguous | 0.4071 | ambiguous | -1.349 | Destabilizing | 0.915 | D | 0.508 | neutral | None | None | None | None | N |
A/L | 0.1836 | likely_benign | 0.1967 | benign | -0.732 | Destabilizing | 0.754 | D | 0.513 | neutral | None | None | None | None | N |
A/M | 0.1908 | likely_benign | 0.2083 | benign | -0.436 | Destabilizing | 0.994 | D | 0.57 | neutral | None | None | None | None | N |
A/N | 0.2273 | likely_benign | 0.2393 | benign | -1.049 | Destabilizing | 0.956 | D | 0.621 | neutral | None | None | None | None | N |
A/P | 0.186 | likely_benign | 0.2101 | benign | -0.813 | Destabilizing | 0.97 | D | 0.571 | neutral | N | 0.459684001 | None | None | N |
A/Q | 0.3265 | likely_benign | 0.3574 | ambiguous | -1.351 | Destabilizing | 0.915 | D | 0.566 | neutral | None | None | None | None | N |
A/R | 0.4056 | ambiguous | 0.4477 | ambiguous | -0.782 | Destabilizing | 0.956 | D | 0.568 | neutral | None | None | None | None | N |
A/S | 0.1006 | likely_benign | 0.1027 | benign | -1.309 | Destabilizing | 0.822 | D | 0.55 | neutral | N | 0.463761669 | None | None | N |
A/T | 0.087 | likely_benign | 0.0891 | benign | -1.324 | Destabilizing | 0.822 | D | 0.545 | neutral | N | 0.489542761 | None | None | N |
A/V | 0.1056 | likely_benign | 0.1059 | benign | -0.813 | Destabilizing | 0.032 | N | 0.251 | neutral | N | 0.442866322 | None | None | N |
A/W | 0.7356 | likely_pathogenic | 0.7788 | pathogenic | -1.58 | Destabilizing | 0.998 | D | 0.65 | neutral | None | None | None | None | N |
A/Y | 0.4915 | ambiguous | 0.5245 | ambiguous | -1.256 | Destabilizing | 0.978 | D | 0.634 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.