Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26531 | 79816;79817;79818 | chr2:178566541;178566540;178566539 | chr2:179431268;179431267;179431266 |
N2AB | 24890 | 74893;74894;74895 | chr2:178566541;178566540;178566539 | chr2:179431268;179431267;179431266 |
N2A | 23963 | 72112;72113;72114 | chr2:178566541;178566540;178566539 | chr2:179431268;179431267;179431266 |
N2B | 17466 | 52621;52622;52623 | chr2:178566541;178566540;178566539 | chr2:179431268;179431267;179431266 |
Novex-1 | 17591 | 52996;52997;52998 | chr2:178566541;178566540;178566539 | chr2:179431268;179431267;179431266 |
Novex-2 | 17658 | 53197;53198;53199 | chr2:178566541;178566540;178566539 | chr2:179431268;179431267;179431266 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.067 | N | 0.253 | 0.073 | 0.256793551483 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
E/K | rs772211147 | 0.33 | 0.958 | N | 0.437 | 0.354 | 0.356072328145 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/K | rs772211147 | 0.33 | 0.958 | N | 0.437 | 0.354 | 0.356072328145 | gnomAD-4.0.0 | 1.9163E-05 | None | None | None | None | N | None | 0 | 2.23624E-05 | None | 0 | 0 | None | 0 | 0 | 2.33875E-05 | 0 | 1.65695E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1223 | likely_benign | 0.1312 | benign | -0.414 | Destabilizing | 0.958 | D | 0.493 | neutral | N | 0.484542373 | None | None | N |
E/C | 0.6903 | likely_pathogenic | 0.7434 | pathogenic | 0.026 | Stabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
E/D | 0.107 | likely_benign | 0.1175 | benign | -0.484 | Destabilizing | 0.067 | N | 0.253 | neutral | N | 0.484406301 | None | None | N |
E/F | 0.6778 | likely_pathogenic | 0.7332 | pathogenic | -0.495 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/G | 0.1182 | likely_benign | 0.1301 | benign | -0.625 | Destabilizing | 0.988 | D | 0.538 | neutral | N | 0.498527604 | None | None | N |
E/H | 0.3775 | ambiguous | 0.4516 | ambiguous | -0.525 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
E/I | 0.2961 | likely_benign | 0.3355 | benign | 0.108 | Stabilizing | 0.995 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/K | 0.1038 | likely_benign | 0.1222 | benign | -0.023 | Destabilizing | 0.958 | D | 0.437 | neutral | N | 0.503973496 | None | None | N |
E/L | 0.2903 | likely_benign | 0.3329 | benign | 0.108 | Stabilizing | 0.995 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/M | 0.3218 | likely_benign | 0.3591 | ambiguous | 0.376 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
E/N | 0.1881 | likely_benign | 0.22 | benign | -0.112 | Destabilizing | 0.982 | D | 0.571 | neutral | None | None | None | None | N |
E/P | 0.7282 | likely_pathogenic | 0.7889 | pathogenic | -0.045 | Destabilizing | 0.995 | D | 0.586 | neutral | None | None | None | None | N |
E/Q | 0.1239 | likely_benign | 0.1399 | benign | -0.093 | Destabilizing | 0.994 | D | 0.521 | neutral | N | 0.473712642 | None | None | N |
E/R | 0.1971 | likely_benign | 0.2395 | benign | 0.114 | Stabilizing | 0.995 | D | 0.589 | neutral | None | None | None | None | N |
E/S | 0.146 | likely_benign | 0.1625 | benign | -0.324 | Destabilizing | 0.968 | D | 0.452 | neutral | None | None | None | None | N |
E/T | 0.137 | likely_benign | 0.1521 | benign | -0.171 | Destabilizing | 0.991 | D | 0.571 | neutral | None | None | None | None | N |
E/V | 0.1717 | likely_benign | 0.1899 | benign | -0.045 | Destabilizing | 0.994 | D | 0.62 | neutral | N | 0.513691844 | None | None | N |
E/W | 0.8422 | likely_pathogenic | 0.8862 | pathogenic | -0.437 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
E/Y | 0.5313 | ambiguous | 0.6089 | pathogenic | -0.294 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.