Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26533 | 79822;79823;79824 | chr2:178566535;178566534;178566533 | chr2:179431262;179431261;179431260 |
N2AB | 24892 | 74899;74900;74901 | chr2:178566535;178566534;178566533 | chr2:179431262;179431261;179431260 |
N2A | 23965 | 72118;72119;72120 | chr2:178566535;178566534;178566533 | chr2:179431262;179431261;179431260 |
N2B | 17468 | 52627;52628;52629 | chr2:178566535;178566534;178566533 | chr2:179431262;179431261;179431260 |
Novex-1 | 17593 | 53002;53003;53004 | chr2:178566535;178566534;178566533 | chr2:179431262;179431261;179431260 |
Novex-2 | 17660 | 53203;53204;53205 | chr2:178566535;178566534;178566533 | chr2:179431262;179431261;179431260 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.958 | N | 0.577 | 0.31 | 0.308278614506 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1206 | likely_benign | 0.1427 | benign | -0.336 | Destabilizing | 0.958 | D | 0.583 | neutral | N | 0.498087674 | None | None | N |
E/C | 0.675 | likely_pathogenic | 0.746 | pathogenic | -0.221 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
E/D | 0.0782 | likely_benign | 0.0917 | benign | -0.211 | Destabilizing | 0.067 | N | 0.337 | neutral | N | 0.466071256 | None | None | N |
E/F | 0.5818 | likely_pathogenic | 0.6569 | pathogenic | -0.222 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/G | 0.1298 | likely_benign | 0.1605 | benign | -0.516 | Destabilizing | 0.988 | D | 0.593 | neutral | N | 0.521732538 | None | None | N |
E/H | 0.3546 | ambiguous | 0.4592 | ambiguous | 0.138 | Stabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
E/I | 0.1991 | likely_benign | 0.2391 | benign | 0.102 | Stabilizing | 0.995 | D | 0.747 | deleterious | None | None | None | None | N |
E/K | 0.1298 | likely_benign | 0.1792 | benign | 0.112 | Stabilizing | 0.958 | D | 0.577 | neutral | N | 0.5112089 | None | None | N |
E/L | 0.2779 | likely_benign | 0.3458 | ambiguous | 0.102 | Stabilizing | 0.995 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/M | 0.3049 | likely_benign | 0.3538 | ambiguous | 0.036 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/N | 0.1341 | likely_benign | 0.169 | benign | -0.046 | Destabilizing | 0.982 | D | 0.615 | neutral | None | None | None | None | N |
E/P | 0.4847 | ambiguous | 0.6088 | pathogenic | -0.025 | Destabilizing | 0.995 | D | 0.627 | neutral | None | None | None | None | N |
E/Q | 0.1329 | likely_benign | 0.1685 | benign | -0.017 | Destabilizing | 0.994 | D | 0.559 | neutral | N | 0.47582689 | None | None | N |
E/R | 0.26 | likely_benign | 0.3494 | ambiguous | 0.405 | Stabilizing | 0.995 | D | 0.626 | neutral | None | None | None | None | N |
E/S | 0.1502 | likely_benign | 0.1833 | benign | -0.264 | Destabilizing | 0.968 | D | 0.579 | neutral | None | None | None | None | N |
E/T | 0.1381 | likely_benign | 0.1612 | benign | -0.122 | Destabilizing | 0.991 | D | 0.621 | neutral | None | None | None | None | N |
E/V | 0.132 | likely_benign | 0.1522 | benign | -0.025 | Destabilizing | 0.994 | D | 0.687 | prob.neutral | N | 0.50488036 | None | None | N |
E/W | 0.8202 | likely_pathogenic | 0.8739 | pathogenic | -0.096 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/Y | 0.4319 | ambiguous | 0.5195 | ambiguous | 0.005 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.