Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26558 | 79897;79898;79899 | chr2:178566460;178566459;178566458 | chr2:179431187;179431186;179431185 |
N2AB | 24917 | 74974;74975;74976 | chr2:178566460;178566459;178566458 | chr2:179431187;179431186;179431185 |
N2A | 23990 | 72193;72194;72195 | chr2:178566460;178566459;178566458 | chr2:179431187;179431186;179431185 |
N2B | 17493 | 52702;52703;52704 | chr2:178566460;178566459;178566458 | chr2:179431187;179431186;179431185 |
Novex-1 | 17618 | 53077;53078;53079 | chr2:178566460;178566459;178566458 | chr2:179431187;179431186;179431185 |
Novex-2 | 17685 | 53278;53279;53280 | chr2:178566460;178566459;178566458 | chr2:179431187;179431186;179431185 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.805 | N | 0.531 | 0.372 | 0.395894371353 | gnomAD-4.0.0 | 2.73734E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59808E-06 | 0 | 0 |
E/K | rs1466993099 | -1.111 | 0.805 | N | 0.501 | 0.293 | 0.319970858106 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/K | rs1466993099 | -1.111 | 0.805 | N | 0.501 | 0.293 | 0.319970858106 | gnomAD-4.0.0 | 2.73741E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59807E-06 | 0 | 0 |
E/Q | None | None | 0.204 | N | 0.263 | 0.187 | 0.190952846119 | gnomAD-4.0.0 | 2.73741E-06 | None | None | None | None | N | None | 2.989E-05 | 0 | None | 0 | 0 | None | 1.88034E-05 | 0 | 8.99518E-07 | 1.15937E-05 | 0 |
E/V | rs1026820295 | None | 0.935 | N | 0.68 | 0.426 | 0.568143352941 | gnomAD-4.0.0 | 1.36867E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.31389E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.126 | likely_benign | 0.1319 | benign | -1.02 | Destabilizing | 0.805 | D | 0.531 | neutral | N | 0.486069679 | None | None | N |
E/C | 0.807 | likely_pathogenic | 0.823 | pathogenic | -0.591 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
E/D | 0.1836 | likely_benign | 0.1862 | benign | -1.365 | Destabilizing | 0.892 | D | 0.464 | neutral | N | 0.4855627 | None | None | N |
E/F | 0.751 | likely_pathogenic | 0.7773 | pathogenic | -0.566 | Destabilizing | 0.987 | D | 0.776 | deleterious | None | None | None | None | N |
E/G | 0.1995 | likely_benign | 0.2033 | benign | -1.411 | Destabilizing | 0.892 | D | 0.654 | neutral | N | 0.490450999 | None | None | N |
E/H | 0.5259 | ambiguous | 0.585 | pathogenic | -0.902 | Destabilizing | 0.997 | D | 0.627 | neutral | None | None | None | None | N |
E/I | 0.2944 | likely_benign | 0.3108 | benign | 0.057 | Stabilizing | 0.975 | D | 0.792 | deleterious | None | None | None | None | N |
E/K | 0.2057 | likely_benign | 0.2372 | benign | -0.977 | Destabilizing | 0.805 | D | 0.501 | neutral | N | 0.493103142 | None | None | N |
E/L | 0.342 | ambiguous | 0.3755 | ambiguous | 0.057 | Stabilizing | 0.95 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/M | 0.3814 | ambiguous | 0.4101 | ambiguous | 0.643 | Stabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | N |
E/N | 0.2751 | likely_benign | 0.2919 | benign | -1.381 | Destabilizing | 0.975 | D | 0.604 | neutral | None | None | None | None | N |
E/P | 0.3743 | ambiguous | 0.4127 | ambiguous | -0.281 | Destabilizing | 0.987 | D | 0.745 | deleterious | None | None | None | None | N |
E/Q | 0.146 | likely_benign | 0.1675 | benign | -1.225 | Destabilizing | 0.204 | N | 0.263 | neutral | N | 0.510766183 | None | None | N |
E/R | 0.3676 | ambiguous | 0.4151 | ambiguous | -0.724 | Destabilizing | 0.95 | D | 0.614 | neutral | None | None | None | None | N |
E/S | 0.2223 | likely_benign | 0.2346 | benign | -1.784 | Destabilizing | 0.845 | D | 0.489 | neutral | None | None | None | None | N |
E/T | 0.1986 | likely_benign | 0.2109 | benign | -1.459 | Destabilizing | 0.073 | N | 0.315 | neutral | None | None | None | None | N |
E/V | 0.1779 | likely_benign | 0.1875 | benign | -0.281 | Destabilizing | 0.935 | D | 0.68 | prob.neutral | N | 0.484944044 | None | None | N |
E/W | 0.9096 | likely_pathogenic | 0.9272 | pathogenic | -0.39 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/Y | 0.6321 | likely_pathogenic | 0.6751 | pathogenic | -0.335 | Destabilizing | 0.996 | D | 0.767 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.