Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26560 | 79903;79904;79905 | chr2:178566454;178566453;178566452 | chr2:179431181;179431180;179431179 |
N2AB | 24919 | 74980;74981;74982 | chr2:178566454;178566453;178566452 | chr2:179431181;179431180;179431179 |
N2A | 23992 | 72199;72200;72201 | chr2:178566454;178566453;178566452 | chr2:179431181;179431180;179431179 |
N2B | 17495 | 52708;52709;52710 | chr2:178566454;178566453;178566452 | chr2:179431181;179431180;179431179 |
Novex-1 | 17620 | 53083;53084;53085 | chr2:178566454;178566453;178566452 | chr2:179431181;179431180;179431179 |
Novex-2 | 17687 | 53284;53285;53286 | chr2:178566454;178566453;178566452 | chr2:179431181;179431180;179431179 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs994825543 | None | 0.885 | N | 0.662 | 0.249 | 0.272639205421 | gnomAD-4.0.0 | 3.42168E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59807E-06 | 0 | 1.65689E-05 |
K/T | None | None | 0.982 | N | 0.679 | 0.375 | 0.353974658523 | gnomAD-4.0.0 | 1.59196E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4146 | ambiguous | 0.3783 | ambiguous | -1.279 | Destabilizing | 0.953 | D | 0.623 | neutral | None | None | None | None | N |
K/C | 0.5664 | likely_pathogenic | 0.5344 | ambiguous | -1.347 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/D | 0.6501 | likely_pathogenic | 0.6053 | pathogenic | -1.25 | Destabilizing | 0.986 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/E | 0.2127 | likely_benign | 0.203 | benign | -1.022 | Destabilizing | 0.885 | D | 0.662 | neutral | N | 0.457544986 | None | None | N |
K/F | 0.7387 | likely_pathogenic | 0.7113 | pathogenic | -0.708 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
K/G | 0.5838 | likely_pathogenic | 0.5379 | ambiguous | -1.727 | Destabilizing | 0.953 | D | 0.675 | neutral | None | None | None | None | N |
K/H | 0.2226 | likely_benign | 0.2152 | benign | -1.904 | Destabilizing | 0.998 | D | 0.676 | prob.neutral | None | None | None | None | N |
K/I | 0.3432 | ambiguous | 0.3217 | benign | -0.042 | Destabilizing | 0.991 | D | 0.756 | deleterious | N | 0.501165264 | None | None | N |
K/L | 0.3485 | ambiguous | 0.3233 | benign | -0.042 | Destabilizing | 0.953 | D | 0.675 | neutral | None | None | None | None | N |
K/M | 0.2178 | likely_benign | 0.2032 | benign | -0.227 | Destabilizing | 0.999 | D | 0.668 | neutral | None | None | None | None | N |
K/N | 0.3474 | ambiguous | 0.3121 | benign | -1.4 | Destabilizing | 0.982 | D | 0.657 | neutral | N | 0.461086724 | None | None | N |
K/P | 0.9644 | likely_pathogenic | 0.9594 | pathogenic | -0.43 | Destabilizing | 0.993 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/Q | 0.1062 | likely_benign | 0.1019 | benign | -1.254 | Destabilizing | 0.322 | N | 0.445 | neutral | N | 0.443117038 | None | None | N |
K/R | 0.0775 | likely_benign | 0.0746 | benign | -0.972 | Destabilizing | 0.046 | N | 0.501 | neutral | N | 0.455854262 | None | None | N |
K/S | 0.3816 | ambiguous | 0.3526 | ambiguous | -2.045 | Highly Destabilizing | 0.953 | D | 0.619 | neutral | None | None | None | None | N |
K/T | 0.1737 | likely_benign | 0.1581 | benign | -1.572 | Destabilizing | 0.982 | D | 0.679 | prob.neutral | N | 0.456102191 | None | None | N |
K/V | 0.3137 | likely_benign | 0.2941 | benign | -0.43 | Destabilizing | 0.993 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/W | 0.7332 | likely_pathogenic | 0.7114 | pathogenic | -0.659 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
K/Y | 0.5588 | ambiguous | 0.5428 | ambiguous | -0.315 | Destabilizing | 0.998 | D | 0.735 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.