Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26581 | 79966;79967;79968 | chr2:178566391;178566390;178566389 | chr2:179431118;179431117;179431116 |
N2AB | 24940 | 75043;75044;75045 | chr2:178566391;178566390;178566389 | chr2:179431118;179431117;179431116 |
N2A | 24013 | 72262;72263;72264 | chr2:178566391;178566390;178566389 | chr2:179431118;179431117;179431116 |
N2B | 17516 | 52771;52772;52773 | chr2:178566391;178566390;178566389 | chr2:179431118;179431117;179431116 |
Novex-1 | 17641 | 53146;53147;53148 | chr2:178566391;178566390;178566389 | chr2:179431118;179431117;179431116 |
Novex-2 | 17708 | 53347;53348;53349 | chr2:178566391;178566390;178566389 | chr2:179431118;179431117;179431116 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.994 | N | 0.793 | 0.511 | 0.765723535249 | gnomAD-4.0.0 | 1.59183E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85884E-06 | 0 | 0 |
V/M | None | None | 0.961 | N | 0.69 | 0.255 | 0.530803083455 | gnomAD-4.0.0 | 1.59189E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85884E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1617 | likely_benign | 0.1579 | benign | -1.899 | Destabilizing | 0.877 | D | 0.58 | neutral | N | 0.517639013 | None | None | N |
V/C | 0.5952 | likely_pathogenic | 0.6027 | pathogenic | -1.404 | Destabilizing | 0.999 | D | 0.729 | deleterious | None | None | None | None | N |
V/D | 0.6831 | likely_pathogenic | 0.6586 | pathogenic | -2.08 | Highly Destabilizing | 0.995 | D | 0.826 | deleterious | None | None | None | None | N |
V/E | 0.5152 | ambiguous | 0.4822 | ambiguous | -1.925 | Destabilizing | 0.994 | D | 0.782 | deleterious | N | 0.51915995 | None | None | N |
V/F | 0.1836 | likely_benign | 0.1895 | benign | -1.171 | Destabilizing | 0.971 | D | 0.774 | deleterious | None | None | None | None | N |
V/G | 0.291 | likely_benign | 0.2781 | benign | -2.385 | Highly Destabilizing | 0.994 | D | 0.793 | deleterious | N | 0.51915995 | None | None | N |
V/H | 0.6486 | likely_pathogenic | 0.6317 | pathogenic | -1.921 | Destabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
V/I | 0.0735 | likely_benign | 0.0769 | benign | -0.587 | Destabilizing | 0.029 | N | 0.233 | neutral | None | None | None | None | N |
V/K | 0.5232 | ambiguous | 0.4879 | ambiguous | -1.648 | Destabilizing | 0.985 | D | 0.775 | deleterious | None | None | None | None | N |
V/L | 0.1839 | likely_benign | 0.1948 | benign | -0.587 | Destabilizing | 0.022 | N | 0.286 | neutral | N | 0.515864587 | None | None | N |
V/M | 0.1521 | likely_benign | 0.1555 | benign | -0.524 | Destabilizing | 0.961 | D | 0.69 | prob.delet. | N | 0.507296666 | None | None | N |
V/N | 0.4883 | ambiguous | 0.4746 | ambiguous | -1.787 | Destabilizing | 0.995 | D | 0.815 | deleterious | None | None | None | None | N |
V/P | 0.6533 | likely_pathogenic | 0.6256 | pathogenic | -0.993 | Destabilizing | 0.995 | D | 0.792 | deleterious | None | None | None | None | N |
V/Q | 0.44 | ambiguous | 0.4211 | ambiguous | -1.74 | Destabilizing | 0.995 | D | 0.782 | deleterious | None | None | None | None | N |
V/R | 0.4593 | ambiguous | 0.4417 | ambiguous | -1.308 | Destabilizing | 0.995 | D | 0.818 | deleterious | None | None | None | None | N |
V/S | 0.2926 | likely_benign | 0.2833 | benign | -2.422 | Highly Destabilizing | 0.985 | D | 0.746 | deleterious | None | None | None | None | N |
V/T | 0.2109 | likely_benign | 0.2079 | benign | -2.125 | Highly Destabilizing | 0.904 | D | 0.659 | prob.neutral | None | None | None | None | N |
V/W | 0.8006 | likely_pathogenic | 0.8051 | pathogenic | -1.552 | Destabilizing | 0.999 | D | 0.705 | prob.delet. | None | None | None | None | N |
V/Y | 0.5354 | ambiguous | 0.5545 | ambiguous | -1.188 | Destabilizing | 0.995 | D | 0.731 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.