Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26620 | 80083;80084;80085 | chr2:178566274;178566273;178566272 | chr2:179431001;179431000;179430999 |
N2AB | 24979 | 75160;75161;75162 | chr2:178566274;178566273;178566272 | chr2:179431001;179431000;179430999 |
N2A | 24052 | 72379;72380;72381 | chr2:178566274;178566273;178566272 | chr2:179431001;179431000;179430999 |
N2B | 17555 | 52888;52889;52890 | chr2:178566274;178566273;178566272 | chr2:179431001;179431000;179430999 |
Novex-1 | 17680 | 53263;53264;53265 | chr2:178566274;178566273;178566272 | chr2:179431001;179431000;179430999 |
Novex-2 | 17747 | 53464;53465;53466 | chr2:178566274;178566273;178566272 | chr2:179431001;179431000;179430999 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1260392231 | None | 1.0 | D | 0.761 | 0.728 | 0.891535782347 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs1260392231 | None | 1.0 | D | 0.761 | 0.728 | 0.891535782347 | gnomAD-4.0.0 | 3.04525E-06 | None | None | None | None | I | None | 3.49724E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.40252E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9576 | likely_pathogenic | 0.9688 | pathogenic | -0.475 | Destabilizing | 1.0 | D | 0.741 | deleterious | D | 0.566887167 | None | None | I |
P/C | 0.9956 | likely_pathogenic | 0.9973 | pathogenic | -0.554 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
P/D | 0.9934 | likely_pathogenic | 0.9944 | pathogenic | -0.222 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
P/E | 0.9916 | likely_pathogenic | 0.9932 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
P/F | 0.9976 | likely_pathogenic | 0.9983 | pathogenic | -0.835 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
P/G | 0.9872 | likely_pathogenic | 0.99 | pathogenic | -0.581 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
P/H | 0.9894 | likely_pathogenic | 0.991 | pathogenic | -0.237 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
P/I | 0.9825 | likely_pathogenic | 0.9861 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
P/K | 0.9912 | likely_pathogenic | 0.992 | pathogenic | -0.311 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
P/L | 0.9525 | likely_pathogenic | 0.9632 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.761 | deleterious | D | 0.599473705 | None | None | I |
P/M | 0.988 | likely_pathogenic | 0.9913 | pathogenic | -0.275 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | I |
P/N | 0.991 | likely_pathogenic | 0.9931 | pathogenic | -0.032 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
P/Q | 0.9871 | likely_pathogenic | 0.9897 | pathogenic | -0.314 | Destabilizing | 1.0 | D | 0.773 | deleterious | D | 0.578408056 | None | None | I |
P/R | 0.9839 | likely_pathogenic | 0.9848 | pathogenic | 0.195 | Stabilizing | 1.0 | D | 0.779 | deleterious | D | 0.644342203 | None | None | I |
P/S | 0.9875 | likely_pathogenic | 0.9912 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.745 | deleterious | D | 0.577901077 | None | None | I |
P/T | 0.9683 | likely_pathogenic | 0.976 | pathogenic | -0.42 | Destabilizing | 1.0 | D | 0.742 | deleterious | D | 0.628090678 | None | None | I |
P/V | 0.9688 | likely_pathogenic | 0.9745 | pathogenic | -0.362 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
P/W | 0.9987 | likely_pathogenic | 0.9991 | pathogenic | -0.894 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
P/Y | 0.9955 | likely_pathogenic | 0.9969 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.