Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26629 | 80110;80111;80112 | chr2:178566247;178566246;178566245 | chr2:179430974;179430973;179430972 |
N2AB | 24988 | 75187;75188;75189 | chr2:178566247;178566246;178566245 | chr2:179430974;179430973;179430972 |
N2A | 24061 | 72406;72407;72408 | chr2:178566247;178566246;178566245 | chr2:179430974;179430973;179430972 |
N2B | 17564 | 52915;52916;52917 | chr2:178566247;178566246;178566245 | chr2:179430974;179430973;179430972 |
Novex-1 | 17689 | 53290;53291;53292 | chr2:178566247;178566246;178566245 | chr2:179430974;179430973;179430972 |
Novex-2 | 17756 | 53491;53492;53493 | chr2:178566247;178566246;178566245 | chr2:179430974;179430973;179430972 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs727504673 | 0.498 | 0.322 | N | 0.303 | 0.186 | 0.1749357433 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78583E-04 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs727504673 | 0.498 | 0.322 | N | 0.303 | 0.186 | 0.1749357433 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs727504673 | 0.498 | 0.322 | N | 0.303 | 0.186 | 0.1749357433 | gnomAD-4.0.0 | 1.98316E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 4.90502E-04 | None | 0 | 0 | 8.4766E-06 | 0 | 0 |
E/V | rs1705791323 | None | 0.991 | N | 0.565 | 0.504 | 0.459552425292 | gnomAD-4.0.0 | 1.59145E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85869E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1853 | likely_benign | 0.1463 | benign | -0.408 | Destabilizing | 0.939 | D | 0.567 | neutral | N | 0.444703401 | None | None | I |
E/C | 0.8639 | likely_pathogenic | 0.7916 | pathogenic | -0.242 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | I |
E/D | 0.133 | likely_benign | 0.1066 | benign | -0.429 | Destabilizing | 0.02 | N | 0.267 | neutral | N | 0.378723551 | None | None | I |
E/F | 0.8118 | likely_pathogenic | 0.6947 | pathogenic | -0.121 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
E/G | 0.1782 | likely_benign | 0.133 | benign | -0.629 | Destabilizing | 0.939 | D | 0.516 | neutral | N | 0.458707274 | None | None | I |
E/H | 0.6659 | likely_pathogenic | 0.5334 | ambiguous | 0.171 | Stabilizing | 0.998 | D | 0.502 | neutral | None | None | None | None | I |
E/I | 0.4046 | ambiguous | 0.3053 | benign | 0.147 | Stabilizing | 0.993 | D | 0.645 | neutral | None | None | None | None | I |
E/K | 0.2989 | likely_benign | 0.2111 | benign | 0.205 | Stabilizing | 0.885 | D | 0.557 | neutral | N | 0.480181412 | None | None | I |
E/L | 0.4231 | ambiguous | 0.3199 | benign | 0.147 | Stabilizing | 0.986 | D | 0.614 | neutral | None | None | None | None | I |
E/M | 0.4695 | ambiguous | 0.3808 | ambiguous | 0.139 | Stabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | I |
E/N | 0.3227 | likely_benign | 0.234 | benign | -0.239 | Destabilizing | 0.986 | D | 0.493 | neutral | None | None | None | None | I |
E/P | 0.6415 | likely_pathogenic | 0.5262 | ambiguous | -0.017 | Destabilizing | 0.993 | D | 0.551 | neutral | None | None | None | None | I |
E/Q | 0.2214 | likely_benign | 0.1738 | benign | -0.176 | Destabilizing | 0.322 | N | 0.303 | neutral | N | 0.513832625 | None | None | I |
E/R | 0.4619 | ambiguous | 0.3496 | ambiguous | 0.505 | Stabilizing | 0.973 | D | 0.513 | neutral | None | None | None | None | I |
E/S | 0.261 | likely_benign | 0.1945 | benign | -0.39 | Destabilizing | 0.953 | D | 0.535 | neutral | None | None | None | None | I |
E/T | 0.2886 | likely_benign | 0.2104 | benign | -0.204 | Destabilizing | 0.986 | D | 0.483 | neutral | None | None | None | None | I |
E/V | 0.2281 | likely_benign | 0.1743 | benign | -0.017 | Destabilizing | 0.991 | D | 0.565 | neutral | N | 0.458864777 | None | None | I |
E/W | 0.9331 | likely_pathogenic | 0.8751 | pathogenic | 0.077 | Stabilizing | 0.999 | D | 0.666 | neutral | None | None | None | None | I |
E/Y | 0.716 | likely_pathogenic | 0.5909 | pathogenic | 0.13 | Stabilizing | 0.998 | D | 0.599 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.