Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26630 | 80113;80114;80115 | chr2:178566244;178566243;178566242 | chr2:179430971;179430970;179430969 |
N2AB | 24989 | 75190;75191;75192 | chr2:178566244;178566243;178566242 | chr2:179430971;179430970;179430969 |
N2A | 24062 | 72409;72410;72411 | chr2:178566244;178566243;178566242 | chr2:179430971;179430970;179430969 |
N2B | 17565 | 52918;52919;52920 | chr2:178566244;178566243;178566242 | chr2:179430971;179430970;179430969 |
Novex-1 | 17690 | 53293;53294;53295 | chr2:178566244;178566243;178566242 | chr2:179430971;179430970;179430969 |
Novex-2 | 17757 | 53494;53495;53496 | chr2:178566244;178566243;178566242 | chr2:179430971;179430970;179430969 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.002 | N | 0.196 | 0.069 | 0.104622674875 | gnomAD-4.0.0 | 1.36852E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79907E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1151 | likely_benign | 0.104 | benign | -0.027 | Destabilizing | 0.822 | D | 0.467 | neutral | N | 0.501980836 | None | None | I |
E/C | 0.7268 | likely_pathogenic | 0.6664 | pathogenic | -0.024 | Destabilizing | 0.998 | D | 0.632 | neutral | None | None | None | None | I |
E/D | 0.0644 | likely_benign | 0.064 | benign | -0.263 | Destabilizing | 0.002 | N | 0.196 | neutral | N | 0.367914699 | None | None | I |
E/F | 0.6308 | likely_pathogenic | 0.5526 | ambiguous | -0.068 | Destabilizing | 0.993 | D | 0.558 | neutral | None | None | None | None | I |
E/G | 0.1017 | likely_benign | 0.0915 | benign | -0.154 | Destabilizing | 0.822 | D | 0.469 | neutral | N | 0.360633649 | None | None | I |
E/H | 0.3886 | ambiguous | 0.3508 | ambiguous | 0.411 | Stabilizing | 0.993 | D | 0.453 | neutral | None | None | None | None | I |
E/I | 0.2832 | likely_benign | 0.2403 | benign | 0.252 | Stabilizing | 0.978 | D | 0.544 | neutral | None | None | None | None | I |
E/K | 0.1655 | likely_benign | 0.1407 | benign | 0.553 | Stabilizing | 0.822 | D | 0.473 | neutral | N | 0.479834695 | None | None | I |
E/L | 0.3483 | ambiguous | 0.2979 | benign | 0.252 | Stabilizing | 0.978 | D | 0.534 | neutral | None | None | None | None | I |
E/M | 0.3789 | ambiguous | 0.3423 | ambiguous | 0.107 | Stabilizing | 0.998 | D | 0.522 | neutral | None | None | None | None | I |
E/N | 0.1368 | likely_benign | 0.1212 | benign | 0.312 | Stabilizing | 0.754 | D | 0.44 | neutral | None | None | None | None | I |
E/P | 0.4219 | ambiguous | 0.3732 | ambiguous | 0.178 | Stabilizing | 0.978 | D | 0.442 | neutral | None | None | None | None | I |
E/Q | 0.1673 | likely_benign | 0.155 | benign | 0.315 | Stabilizing | 0.904 | D | 0.439 | neutral | N | 0.489494328 | None | None | I |
E/R | 0.2895 | likely_benign | 0.2551 | benign | 0.722 | Stabilizing | 0.978 | D | 0.452 | neutral | None | None | None | None | I |
E/S | 0.1395 | likely_benign | 0.126 | benign | 0.177 | Stabilizing | 0.86 | D | 0.454 | neutral | None | None | None | None | I |
E/T | 0.1482 | likely_benign | 0.1327 | benign | 0.286 | Stabilizing | 0.86 | D | 0.431 | neutral | None | None | None | None | I |
E/V | 0.1829 | likely_benign | 0.1578 | benign | 0.178 | Stabilizing | 0.97 | D | 0.461 | neutral | N | 0.459757492 | None | None | I |
E/W | 0.8184 | likely_pathogenic | 0.7697 | pathogenic | -0.011 | Destabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | I |
E/Y | 0.4557 | ambiguous | 0.3986 | ambiguous | 0.165 | Stabilizing | 0.993 | D | 0.515 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.