Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26635 | 80128;80129;80130 | chr2:178566229;178566228;178566227 | chr2:179430956;179430955;179430954 |
N2AB | 24994 | 75205;75206;75207 | chr2:178566229;178566228;178566227 | chr2:179430956;179430955;179430954 |
N2A | 24067 | 72424;72425;72426 | chr2:178566229;178566228;178566227 | chr2:179430956;179430955;179430954 |
N2B | 17570 | 52933;52934;52935 | chr2:178566229;178566228;178566227 | chr2:179430956;179430955;179430954 |
Novex-1 | 17695 | 53308;53309;53310 | chr2:178566229;178566228;178566227 | chr2:179430956;179430955;179430954 |
Novex-2 | 17762 | 53509;53510;53511 | chr2:178566229;178566228;178566227 | chr2:179430956;179430955;179430954 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs1301645407 | None | 0.007 | N | 0.239 | 0.138 | 0.101711395817 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/G | rs1301645407 | None | 0.007 | N | 0.239 | 0.138 | 0.101711395817 | gnomAD-4.0.0 | 2.56239E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78668E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1291 | likely_benign | 0.1156 | benign | 0.091 | Stabilizing | 0.309 | N | 0.296 | neutral | N | 0.502692912 | None | None | N |
D/C | 0.5098 | ambiguous | 0.4667 | ambiguous | -0.098 | Destabilizing | 0.996 | D | 0.298 | neutral | None | None | None | None | N |
D/E | 0.0848 | likely_benign | 0.0843 | benign | -0.34 | Destabilizing | 0.003 | N | 0.166 | neutral | N | 0.410436112 | None | None | N |
D/F | 0.6134 | likely_pathogenic | 0.5486 | ambiguous | -0.09 | Destabilizing | 0.953 | D | 0.311 | neutral | None | None | None | None | N |
D/G | 0.1123 | likely_benign | 0.1013 | benign | 0.003 | Stabilizing | 0.007 | N | 0.239 | neutral | N | 0.453378812 | None | None | N |
D/H | 0.2335 | likely_benign | 0.2121 | benign | 0.527 | Stabilizing | 0.939 | D | 0.286 | neutral | N | 0.463467248 | None | None | N |
D/I | 0.3399 | likely_benign | 0.3017 | benign | 0.251 | Stabilizing | 0.91 | D | 0.329 | neutral | None | None | None | None | N |
D/K | 0.2347 | likely_benign | 0.2083 | benign | 0.431 | Stabilizing | 0.59 | D | 0.299 | neutral | None | None | None | None | N |
D/L | 0.3383 | likely_benign | 0.3032 | benign | 0.251 | Stabilizing | 0.59 | D | 0.351 | neutral | None | None | None | None | N |
D/M | 0.489 | ambiguous | 0.4575 | ambiguous | 0.046 | Stabilizing | 0.996 | D | 0.305 | neutral | None | None | None | None | N |
D/N | 0.0909 | likely_benign | 0.0837 | benign | 0.296 | Stabilizing | 0.684 | D | 0.245 | neutral | N | 0.47494895 | None | None | N |
D/P | 0.3492 | ambiguous | 0.3316 | benign | 0.216 | Stabilizing | 0.953 | D | 0.304 | neutral | None | None | None | None | N |
D/Q | 0.209 | likely_benign | 0.1983 | benign | 0.273 | Stabilizing | 0.59 | D | 0.252 | neutral | None | None | None | None | N |
D/R | 0.3007 | likely_benign | 0.2695 | benign | 0.626 | Stabilizing | 0.91 | D | 0.341 | neutral | None | None | None | None | N |
D/S | 0.093 | likely_benign | 0.0865 | benign | 0.184 | Stabilizing | 0.101 | N | 0.229 | neutral | None | None | None | None | N |
D/T | 0.1716 | likely_benign | 0.1565 | benign | 0.256 | Stabilizing | 0.009 | N | 0.252 | neutral | None | None | None | None | N |
D/V | 0.2009 | likely_benign | 0.1758 | benign | 0.216 | Stabilizing | 0.521 | D | 0.356 | neutral | N | 0.470722177 | None | None | N |
D/W | 0.8108 | likely_pathogenic | 0.7762 | pathogenic | -0.09 | Destabilizing | 0.996 | D | 0.397 | neutral | None | None | None | None | N |
D/Y | 0.2644 | likely_benign | 0.2265 | benign | 0.128 | Stabilizing | 0.979 | D | 0.308 | neutral | N | 0.466429763 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.