Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26650 | 80173;80174;80175 | chr2:178566184;178566183;178566182 | chr2:179430911;179430910;179430909 |
N2AB | 25009 | 75250;75251;75252 | chr2:178566184;178566183;178566182 | chr2:179430911;179430910;179430909 |
N2A | 24082 | 72469;72470;72471 | chr2:178566184;178566183;178566182 | chr2:179430911;179430910;179430909 |
N2B | 17585 | 52978;52979;52980 | chr2:178566184;178566183;178566182 | chr2:179430911;179430910;179430909 |
Novex-1 | 17710 | 53353;53354;53355 | chr2:178566184;178566183;178566182 | chr2:179430911;179430910;179430909 |
Novex-2 | 17777 | 53554;53555;53556 | chr2:178566184;178566183;178566182 | chr2:179430911;179430910;179430909 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.333 | D | 0.237 | 0.459 | 0.514472708086 | gnomAD-4.0.0 | 3.42128E-06 | None | None | None | None | N | None | 2.989E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6986E-06 | 1.15937E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.758 | likely_pathogenic | 0.6903 | pathogenic | -2.748 | Highly Destabilizing | 0.992 | D | 0.666 | neutral | None | None | None | None | N |
I/C | 0.9063 | likely_pathogenic | 0.8917 | pathogenic | -2.489 | Highly Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
I/D | 0.9941 | likely_pathogenic | 0.9916 | pathogenic | -3.112 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
I/E | 0.9798 | likely_pathogenic | 0.9706 | pathogenic | -2.933 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
I/F | 0.3435 | ambiguous | 0.3075 | benign | -1.822 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
I/G | 0.9747 | likely_pathogenic | 0.9637 | pathogenic | -3.265 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
I/H | 0.9663 | likely_pathogenic | 0.9551 | pathogenic | -2.59 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
I/K | 0.9455 | likely_pathogenic | 0.9264 | pathogenic | -2.217 | Highly Destabilizing | 0.999 | D | 0.845 | deleterious | D | 0.641986607 | None | None | N |
I/L | 0.1831 | likely_benign | 0.1678 | benign | -1.271 | Destabilizing | 0.889 | D | 0.422 | neutral | D | 0.539280545 | None | None | N |
I/M | 0.1308 | likely_benign | 0.1219 | benign | -1.344 | Destabilizing | 0.998 | D | 0.689 | prob.neutral | D | 0.615035865 | None | None | N |
I/N | 0.9403 | likely_pathogenic | 0.9186 | pathogenic | -2.508 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
I/P | 0.9914 | likely_pathogenic | 0.9887 | pathogenic | -1.743 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
I/Q | 0.9486 | likely_pathogenic | 0.9316 | pathogenic | -2.47 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
I/R | 0.9156 | likely_pathogenic | 0.8853 | pathogenic | -1.755 | Destabilizing | 0.999 | D | 0.852 | deleterious | D | 0.641986607 | None | None | N |
I/S | 0.8702 | likely_pathogenic | 0.8311 | pathogenic | -3.237 | Highly Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
I/T | 0.6539 | likely_pathogenic | 0.5554 | ambiguous | -2.909 | Highly Destabilizing | 0.989 | D | 0.742 | deleterious | D | 0.641582998 | None | None | N |
I/V | 0.0998 | likely_benign | 0.0921 | benign | -1.743 | Destabilizing | 0.333 | N | 0.237 | neutral | D | 0.563404172 | None | None | N |
I/W | 0.9315 | likely_pathogenic | 0.9233 | pathogenic | -2.124 | Highly Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
I/Y | 0.8838 | likely_pathogenic | 0.868 | pathogenic | -1.888 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.