Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2666 | 8221;8222;8223 | chr2:178771331;178771330;178771329 | chr2:179636058;179636057;179636056 |
N2AB | 2666 | 8221;8222;8223 | chr2:178771331;178771330;178771329 | chr2:179636058;179636057;179636056 |
N2A | 2666 | 8221;8222;8223 | chr2:178771331;178771330;178771329 | chr2:179636058;179636057;179636056 |
N2B | 2620 | 8083;8084;8085 | chr2:178771331;178771330;178771329 | chr2:179636058;179636057;179636056 |
Novex-1 | 2620 | 8083;8084;8085 | chr2:178771331;178771330;178771329 | chr2:179636058;179636057;179636056 |
Novex-2 | 2620 | 8083;8084;8085 | chr2:178771331;178771330;178771329 | chr2:179636058;179636057;179636056 |
Novex-3 | 2666 | 8221;8222;8223 | chr2:178771331;178771330;178771329 | chr2:179636058;179636057;179636056 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | rs2091455237 | None | None | N | 0.203 | 0.171 | 0.408988072059 | gnomAD-4.0.0 | 2.73634E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.5972E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2226 | likely_benign | 0.2464 | benign | -1.256 | Destabilizing | 0.016 | N | 0.297 | neutral | None | None | None | None | N |
R/C | 0.1494 | likely_benign | 0.1631 | benign | -1.252 | Destabilizing | 0.864 | D | 0.334 | neutral | None | None | None | None | N |
R/D | 0.4516 | ambiguous | 0.4663 | ambiguous | -0.104 | Destabilizing | 0.072 | N | 0.369 | neutral | None | None | None | None | N |
R/E | 0.2165 | likely_benign | 0.2286 | benign | 0.048 | Stabilizing | 0.016 | N | 0.281 | neutral | None | None | None | None | N |
R/F | 0.2902 | likely_benign | 0.3061 | benign | -0.922 | Destabilizing | 0.356 | N | 0.366 | neutral | None | None | None | None | N |
R/G | 0.1849 | likely_benign | 0.1982 | benign | -1.587 | Destabilizing | None | N | 0.203 | neutral | N | 0.504113891 | None | None | N |
R/H | 0.0822 | likely_benign | 0.0845 | benign | -1.617 | Destabilizing | None | N | 0.199 | neutral | None | None | None | None | N |
R/I | 0.1095 | likely_benign | 0.1153 | benign | -0.345 | Destabilizing | 0.029 | N | 0.398 | neutral | N | 0.509584452 | None | None | N |
R/K | 0.0771 | likely_benign | 0.0812 | benign | -1.131 | Destabilizing | None | N | 0.121 | neutral | N | 0.440852345 | None | None | N |
R/L | 0.1384 | likely_benign | 0.1443 | benign | -0.345 | Destabilizing | 0.016 | N | 0.369 | neutral | None | None | None | None | N |
R/M | 0.1548 | likely_benign | 0.1667 | benign | -0.706 | Destabilizing | 0.356 | N | 0.348 | neutral | None | None | None | None | N |
R/N | 0.3081 | likely_benign | 0.3371 | benign | -0.637 | Destabilizing | 0.072 | N | 0.246 | neutral | None | None | None | None | N |
R/P | 0.7544 | likely_pathogenic | 0.6918 | pathogenic | -0.63 | Destabilizing | 0.136 | N | 0.389 | neutral | None | None | None | None | N |
R/Q | 0.0851 | likely_benign | 0.0879 | benign | -0.778 | Destabilizing | 0.038 | N | 0.325 | neutral | None | None | None | None | N |
R/S | 0.2473 | likely_benign | 0.2703 | benign | -1.588 | Destabilizing | 0.012 | N | 0.357 | neutral | N | 0.499216629 | None | None | N |
R/T | 0.1072 | likely_benign | 0.1184 | benign | -1.239 | Destabilizing | 0.055 | N | 0.361 | neutral | N | 0.503451382 | None | None | N |
R/V | 0.1682 | likely_benign | 0.1782 | benign | -0.63 | Destabilizing | None | N | 0.253 | neutral | None | None | None | None | N |
R/W | 0.1504 | likely_benign | 0.148 | benign | -0.44 | Destabilizing | 0.864 | D | 0.362 | neutral | None | None | None | None | N |
R/Y | 0.2415 | likely_benign | 0.251 | benign | -0.211 | Destabilizing | 0.214 | N | 0.373 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.