Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26662 | 80209;80210;80211 | chr2:178566148;178566147;178566146 | chr2:179430875;179430874;179430873 |
N2AB | 25021 | 75286;75287;75288 | chr2:178566148;178566147;178566146 | chr2:179430875;179430874;179430873 |
N2A | 24094 | 72505;72506;72507 | chr2:178566148;178566147;178566146 | chr2:179430875;179430874;179430873 |
N2B | 17597 | 53014;53015;53016 | chr2:178566148;178566147;178566146 | chr2:179430875;179430874;179430873 |
Novex-1 | 17722 | 53389;53390;53391 | chr2:178566148;178566147;178566146 | chr2:179430875;179430874;179430873 |
Novex-2 | 17789 | 53590;53591;53592 | chr2:178566148;178566147;178566146 | chr2:179430875;179430874;179430873 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | None | N | 0.359 | 0.058 | 0.176091768786 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4146 | ambiguous | 0.2749 | benign | -1.957 | Destabilizing | 0.007 | N | 0.529 | neutral | None | None | None | None | N |
I/C | 0.6028 | likely_pathogenic | 0.4476 | ambiguous | -1.228 | Destabilizing | 0.356 | N | 0.629 | neutral | None | None | None | None | N |
I/D | 0.8037 | likely_pathogenic | 0.6582 | pathogenic | -1.511 | Destabilizing | 0.072 | N | 0.673 | neutral | None | None | None | None | N |
I/E | 0.665 | likely_pathogenic | 0.5067 | ambiguous | -1.302 | Destabilizing | 0.072 | N | 0.662 | neutral | None | None | None | None | N |
I/F | 0.1855 | likely_benign | 0.1234 | benign | -1.013 | Destabilizing | 0.093 | N | 0.619 | neutral | N | 0.495804225 | None | None | N |
I/G | 0.7333 | likely_pathogenic | 0.5776 | pathogenic | -2.48 | Highly Destabilizing | 0.038 | N | 0.645 | neutral | None | None | None | None | N |
I/H | 0.434 | ambiguous | 0.292 | benign | -1.881 | Destabilizing | 0.864 | D | 0.649 | neutral | None | None | None | None | N |
I/K | 0.4846 | ambiguous | 0.3407 | ambiguous | -1.274 | Destabilizing | 0.072 | N | 0.658 | neutral | None | None | None | None | N |
I/L | 0.1282 | likely_benign | 0.092 | benign | -0.474 | Destabilizing | None | N | 0.161 | neutral | N | 0.462249012 | None | None | N |
I/M | 0.1156 | likely_benign | 0.09 | benign | -0.493 | Destabilizing | 0.093 | N | 0.601 | neutral | N | 0.486915383 | None | None | N |
I/N | 0.2766 | likely_benign | 0.1807 | benign | -1.505 | Destabilizing | 0.171 | N | 0.685 | prob.neutral | N | 0.46840698 | None | None | N |
I/P | 0.9749 | likely_pathogenic | 0.9407 | pathogenic | -0.945 | Destabilizing | 0.356 | N | 0.683 | prob.neutral | None | None | None | None | N |
I/Q | 0.457 | ambiguous | 0.3163 | benign | -1.347 | Destabilizing | 0.214 | N | 0.662 | neutral | None | None | None | None | N |
I/R | 0.4008 | ambiguous | 0.2551 | benign | -1.123 | Destabilizing | 0.214 | N | 0.676 | prob.neutral | None | None | None | None | N |
I/S | 0.2764 | likely_benign | 0.176 | benign | -2.29 | Highly Destabilizing | 0.001 | N | 0.452 | neutral | N | 0.423306622 | None | None | N |
I/T | 0.1901 | likely_benign | 0.1169 | benign | -1.932 | Destabilizing | None | N | 0.359 | neutral | N | 0.351769023 | None | None | N |
I/V | 0.0778 | likely_benign | 0.0705 | benign | -0.945 | Destabilizing | None | N | 0.152 | neutral | N | 0.404432859 | None | None | N |
I/W | 0.8083 | likely_pathogenic | 0.6625 | pathogenic | -1.321 | Destabilizing | 0.864 | D | 0.664 | neutral | None | None | None | None | N |
I/Y | 0.4672 | ambiguous | 0.329 | benign | -0.994 | Destabilizing | 0.356 | N | 0.651 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.