Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26677 | 80254;80255;80256 | chr2:178566103;178566102;178566101 | chr2:179430830;179430829;179430828 |
N2AB | 25036 | 75331;75332;75333 | chr2:178566103;178566102;178566101 | chr2:179430830;179430829;179430828 |
N2A | 24109 | 72550;72551;72552 | chr2:178566103;178566102;178566101 | chr2:179430830;179430829;179430828 |
N2B | 17612 | 53059;53060;53061 | chr2:178566103;178566102;178566101 | chr2:179430830;179430829;179430828 |
Novex-1 | 17737 | 53434;53435;53436 | chr2:178566103;178566102;178566101 | chr2:179430830;179430829;179430828 |
Novex-2 | 17804 | 53635;53636;53637 | chr2:178566103;178566102;178566101 | chr2:179430830;179430829;179430828 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs2154165331 | None | 0.034 | N | 0.159 | 0.118 | 0.233785782151 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0979 | likely_benign | 0.0884 | benign | -1.107 | Destabilizing | 0.309 | N | 0.388 | neutral | N | 0.494544328 | None | None | N |
T/C | 0.4367 | ambiguous | 0.4269 | ambiguous | -0.668 | Destabilizing | 0.996 | D | 0.52 | neutral | None | None | None | None | N |
T/D | 0.6499 | likely_pathogenic | 0.6012 | pathogenic | 0.251 | Stabilizing | 0.742 | D | 0.495 | neutral | None | None | None | None | N |
T/E | 0.6394 | likely_pathogenic | 0.5834 | pathogenic | 0.311 | Stabilizing | 0.59 | D | 0.505 | neutral | None | None | None | None | N |
T/F | 0.2918 | likely_benign | 0.2627 | benign | -1.073 | Destabilizing | 0.984 | D | 0.601 | neutral | None | None | None | None | N |
T/G | 0.3337 | likely_benign | 0.3162 | benign | -1.402 | Destabilizing | 0.742 | D | 0.539 | neutral | None | None | None | None | N |
T/H | 0.3495 | ambiguous | 0.3285 | benign | -1.537 | Destabilizing | 0.987 | D | 0.575 | neutral | None | None | None | None | N |
T/I | 0.1659 | likely_benign | 0.1608 | benign | -0.39 | Destabilizing | 0.939 | D | 0.562 | neutral | N | 0.495426663 | None | None | N |
T/K | 0.5264 | ambiguous | 0.4817 | ambiguous | -0.403 | Destabilizing | 0.009 | N | 0.262 | neutral | None | None | None | None | N |
T/L | 0.1058 | likely_benign | 0.097 | benign | -0.39 | Destabilizing | 0.742 | D | 0.505 | neutral | None | None | None | None | N |
T/M | 0.0793 | likely_benign | 0.0822 | benign | -0.234 | Destabilizing | 0.984 | D | 0.539 | neutral | None | None | None | None | N |
T/N | 0.1289 | likely_benign | 0.1213 | benign | -0.46 | Destabilizing | 0.684 | D | 0.431 | neutral | N | 0.433242053 | None | None | N |
T/P | 0.2342 | likely_benign | 0.2174 | benign | -0.598 | Destabilizing | 0.939 | D | 0.555 | neutral | D | 0.523613342 | None | None | N |
T/Q | 0.3786 | ambiguous | 0.359 | ambiguous | -0.525 | Destabilizing | 0.91 | D | 0.56 | neutral | None | None | None | None | N |
T/R | 0.4552 | ambiguous | 0.4044 | ambiguous | -0.367 | Destabilizing | 0.59 | D | 0.543 | neutral | None | None | None | None | N |
T/S | 0.1193 | likely_benign | 0.1104 | benign | -0.92 | Destabilizing | 0.034 | N | 0.159 | neutral | N | 0.445149771 | None | None | N |
T/V | 0.1342 | likely_benign | 0.1277 | benign | -0.598 | Destabilizing | 0.742 | D | 0.439 | neutral | None | None | None | None | N |
T/W | 0.6547 | likely_pathogenic | 0.6557 | pathogenic | -0.927 | Destabilizing | 0.996 | D | 0.604 | neutral | None | None | None | None | N |
T/Y | 0.3272 | likely_benign | 0.3104 | benign | -0.683 | Destabilizing | 0.984 | D | 0.595 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.