Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26716 | 80371;80372;80373 | chr2:178565986;178565985;178565984 | chr2:179430713;179430712;179430711 |
N2AB | 25075 | 75448;75449;75450 | chr2:178565986;178565985;178565984 | chr2:179430713;179430712;179430711 |
N2A | 24148 | 72667;72668;72669 | chr2:178565986;178565985;178565984 | chr2:179430713;179430712;179430711 |
N2B | 17651 | 53176;53177;53178 | chr2:178565986;178565985;178565984 | chr2:179430713;179430712;179430711 |
Novex-1 | 17776 | 53551;53552;53553 | chr2:178565986;178565985;178565984 | chr2:179430713;179430712;179430711 |
Novex-2 | 17843 | 53752;53753;53754 | chr2:178565986;178565985;178565984 | chr2:179430713;179430712;179430711 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs902372912 | None | 0.557 | N | 0.553 | 0.287 | 0.28722502521 | gnomAD-4.0.0 | 9.57999E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.25938E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5486 | ambiguous | 0.5779 | pathogenic | -0.17 | Destabilizing | 0.735 | D | 0.569 | neutral | None | None | None | None | I |
K/C | 0.6916 | likely_pathogenic | 0.7424 | pathogenic | -0.173 | Destabilizing | 0.998 | D | 0.799 | deleterious | None | None | None | None | I |
K/D | 0.844 | likely_pathogenic | 0.8607 | pathogenic | -0.057 | Destabilizing | 0.951 | D | 0.687 | prob.neutral | None | None | None | None | I |
K/E | 0.3905 | ambiguous | 0.4309 | ambiguous | -0.009 | Destabilizing | 0.557 | D | 0.553 | neutral | N | 0.49923968 | None | None | I |
K/F | 0.8625 | likely_pathogenic | 0.8864 | pathogenic | -0.068 | Destabilizing | 0.94 | D | 0.797 | deleterious | None | None | None | None | I |
K/G | 0.6511 | likely_pathogenic | 0.6706 | pathogenic | -0.466 | Destabilizing | 0.951 | D | 0.653 | neutral | None | None | None | None | I |
K/H | 0.3803 | ambiguous | 0.4218 | ambiguous | -0.834 | Destabilizing | 0.995 | D | 0.723 | prob.delet. | None | None | None | None | I |
K/I | 0.4303 | ambiguous | 0.4631 | ambiguous | 0.558 | Stabilizing | 0.364 | N | 0.793 | deleterious | None | None | None | None | I |
K/L | 0.4576 | ambiguous | 0.4905 | ambiguous | 0.558 | Stabilizing | 0.075 | N | 0.613 | neutral | None | None | None | None | I |
K/M | 0.3336 | likely_benign | 0.3694 | ambiguous | 0.41 | Stabilizing | 0.976 | D | 0.719 | prob.delet. | D | 0.524772843 | None | None | I |
K/N | 0.564 | ambiguous | 0.6316 | pathogenic | -0.001 | Destabilizing | 0.936 | D | 0.679 | prob.neutral | N | 0.509534032 | None | None | I |
K/P | 0.9544 | likely_pathogenic | 0.9533 | pathogenic | 0.345 | Stabilizing | 0.975 | D | 0.764 | deleterious | None | None | None | None | I |
K/Q | 0.1885 | likely_benign | 0.2093 | benign | -0.151 | Destabilizing | 0.783 | D | 0.712 | prob.delet. | N | 0.471842435 | None | None | I |
K/R | 0.0888 | likely_benign | 0.0874 | benign | -0.353 | Destabilizing | 0.436 | N | 0.556 | neutral | N | 0.46582054 | None | None | I |
K/S | 0.5719 | likely_pathogenic | 0.6174 | pathogenic | -0.528 | Destabilizing | 0.735 | D | 0.556 | neutral | None | None | None | None | I |
K/T | 0.2124 | likely_benign | 0.2355 | benign | -0.309 | Destabilizing | 0.004 | N | 0.336 | neutral | N | 0.385124741 | None | None | I |
K/V | 0.4283 | ambiguous | 0.4556 | ambiguous | 0.345 | Stabilizing | 0.274 | N | 0.646 | neutral | None | None | None | None | I |
K/W | 0.8088 | likely_pathogenic | 0.8363 | pathogenic | -0.01 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | I |
K/Y | 0.7531 | likely_pathogenic | 0.7906 | pathogenic | 0.286 | Stabilizing | 0.848 | D | 0.777 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.