Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26762 | 80509;80510;80511 | chr2:178565848;178565847;178565846 | chr2:179430575;179430574;179430573 |
N2AB | 25121 | 75586;75587;75588 | chr2:178565848;178565847;178565846 | chr2:179430575;179430574;179430573 |
N2A | 24194 | 72805;72806;72807 | chr2:178565848;178565847;178565846 | chr2:179430575;179430574;179430573 |
N2B | 17697 | 53314;53315;53316 | chr2:178565848;178565847;178565846 | chr2:179430575;179430574;179430573 |
Novex-1 | 17822 | 53689;53690;53691 | chr2:178565848;178565847;178565846 | chr2:179430575;179430574;179430573 |
Novex-2 | 17889 | 53890;53891;53892 | chr2:178565848;178565847;178565846 | chr2:179430575;179430574;179430573 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.763 | N | 0.507 | 0.32 | 0.247872288689 | gnomAD-4.0.0 | 1.59164E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85922E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4336 | ambiguous | 0.505 | ambiguous | -0.556 | Destabilizing | 0.777 | D | 0.571 | neutral | N | 0.513168983 | None | None | I |
E/C | 0.9616 | likely_pathogenic | 0.9711 | pathogenic | -0.267 | Destabilizing | 0.997 | D | 0.745 | deleterious | None | None | None | None | I |
E/D | 0.2437 | likely_benign | 0.2653 | benign | -0.449 | Destabilizing | 0.31 | N | 0.385 | neutral | N | 0.472254157 | None | None | I |
E/F | 0.9732 | likely_pathogenic | 0.9793 | pathogenic | -0.188 | Destabilizing | 0.999 | D | 0.675 | neutral | None | None | None | None | I |
E/G | 0.693 | likely_pathogenic | 0.7517 | pathogenic | -0.776 | Destabilizing | 0.976 | D | 0.551 | neutral | N | 0.474804463 | None | None | I |
E/H | 0.8792 | likely_pathogenic | 0.9109 | pathogenic | 0.188 | Stabilizing | 0.994 | D | 0.685 | prob.neutral | None | None | None | None | I |
E/I | 0.601 | likely_pathogenic | 0.6529 | pathogenic | 0.006 | Stabilizing | 0.966 | D | 0.681 | prob.neutral | None | None | None | None | I |
E/K | 0.5419 | ambiguous | 0.6203 | pathogenic | 0.278 | Stabilizing | 0.763 | D | 0.507 | neutral | N | 0.495103297 | None | None | I |
E/L | 0.8254 | likely_pathogenic | 0.8572 | pathogenic | 0.006 | Stabilizing | 0.933 | D | 0.637 | neutral | None | None | None | None | I |
E/M | 0.7985 | likely_pathogenic | 0.8337 | pathogenic | 0.057 | Stabilizing | 0.95 | D | 0.675 | prob.neutral | None | None | None | None | I |
E/N | 0.6204 | likely_pathogenic | 0.6831 | pathogenic | -0.299 | Destabilizing | 0.867 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/P | 0.8905 | likely_pathogenic | 0.9032 | pathogenic | -0.162 | Destabilizing | 0.809 | D | 0.656 | neutral | None | None | None | None | I |
E/Q | 0.3801 | ambiguous | 0.4333 | ambiguous | -0.225 | Destabilizing | 0.125 | N | 0.342 | neutral | N | 0.470038885 | None | None | I |
E/R | 0.7039 | likely_pathogenic | 0.758 | pathogenic | 0.605 | Stabilizing | 0.937 | D | 0.673 | neutral | None | None | None | None | I |
E/S | 0.55 | ambiguous | 0.6216 | pathogenic | -0.428 | Destabilizing | 0.822 | D | 0.597 | neutral | None | None | None | None | I |
E/T | 0.555 | ambiguous | 0.6369 | pathogenic | -0.23 | Destabilizing | 0.957 | D | 0.627 | neutral | None | None | None | None | I |
E/V | 0.4862 | ambiguous | 0.5384 | ambiguous | -0.162 | Destabilizing | 0.882 | D | 0.643 | neutral | N | 0.476800061 | None | None | I |
E/W | 0.994 | likely_pathogenic | 0.9959 | pathogenic | 0.07 | Stabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | I |
E/Y | 0.9263 | likely_pathogenic | 0.9434 | pathogenic | 0.085 | Stabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.