Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26790 | 80593;80594;80595 | chr2:178565764;178565763;178565762 | chr2:179430491;179430490;179430489 |
N2AB | 25149 | 75670;75671;75672 | chr2:178565764;178565763;178565762 | chr2:179430491;179430490;179430489 |
N2A | 24222 | 72889;72890;72891 | chr2:178565764;178565763;178565762 | chr2:179430491;179430490;179430489 |
N2B | 17725 | 53398;53399;53400 | chr2:178565764;178565763;178565762 | chr2:179430491;179430490;179430489 |
Novex-1 | 17850 | 53773;53774;53775 | chr2:178565764;178565763;178565762 | chr2:179430491;179430490;179430489 |
Novex-2 | 17917 | 53974;53975;53976 | chr2:178565764;178565763;178565762 | chr2:179430491;179430490;179430489 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1023059265 | None | 0.032 | N | 0.247 | 0.158 | 0.235664433957 | gnomAD-4.0.0 | 1.59167E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85933E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1066 | likely_benign | 0.0988 | benign | -0.653 | Destabilizing | 0.656 | D | 0.504 | neutral | N | 0.464937892 | None | None | I |
T/C | 0.4077 | ambiguous | 0.4033 | ambiguous | -0.302 | Destabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | I |
T/D | 0.4977 | ambiguous | 0.4794 | ambiguous | 0.28 | Stabilizing | 0.993 | D | 0.674 | neutral | None | None | None | None | I |
T/E | 0.3364 | likely_benign | 0.3353 | benign | 0.239 | Stabilizing | 0.993 | D | 0.607 | neutral | None | None | None | None | I |
T/F | 0.2847 | likely_benign | 0.273 | benign | -0.967 | Destabilizing | 0.956 | D | 0.725 | prob.delet. | None | None | None | None | I |
T/G | 0.3058 | likely_benign | 0.2837 | benign | -0.846 | Destabilizing | 0.978 | D | 0.623 | neutral | None | None | None | None | I |
T/H | 0.3267 | likely_benign | 0.3145 | benign | -1.105 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | I |
T/I | 0.1259 | likely_benign | 0.1414 | benign | -0.25 | Destabilizing | 0.032 | N | 0.247 | neutral | N | 0.486409243 | None | None | I |
T/K | 0.2164 | likely_benign | 0.2232 | benign | -0.439 | Destabilizing | 0.978 | D | 0.608 | neutral | None | None | None | None | I |
T/L | 0.0822 | likely_benign | 0.0883 | benign | -0.25 | Destabilizing | 0.303 | N | 0.469 | neutral | None | None | None | None | I |
T/M | 0.0773 | likely_benign | 0.078 | benign | 0.022 | Stabilizing | 0.559 | D | 0.367 | neutral | None | None | None | None | I |
T/N | 0.1664 | likely_benign | 0.1599 | benign | -0.259 | Destabilizing | 0.99 | D | 0.572 | neutral | N | 0.51673215 | None | None | I |
T/P | 0.4755 | ambiguous | 0.3982 | ambiguous | -0.354 | Destabilizing | 0.99 | D | 0.685 | prob.neutral | N | 0.486198265 | None | None | I |
T/Q | 0.2403 | likely_benign | 0.235 | benign | -0.452 | Destabilizing | 0.978 | D | 0.676 | prob.neutral | None | None | None | None | I |
T/R | 0.1848 | likely_benign | 0.1851 | benign | -0.192 | Destabilizing | 0.978 | D | 0.685 | prob.neutral | None | None | None | None | I |
T/S | 0.1414 | likely_benign | 0.1317 | benign | -0.566 | Destabilizing | 0.904 | D | 0.495 | neutral | N | 0.444943835 | None | None | I |
T/V | 0.0996 | likely_benign | 0.1117 | benign | -0.354 | Destabilizing | 0.303 | N | 0.501 | neutral | None | None | None | None | I |
T/W | 0.6048 | likely_pathogenic | 0.5732 | pathogenic | -0.908 | Destabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | I |
T/Y | 0.3421 | ambiguous | 0.3287 | benign | -0.656 | Destabilizing | 0.978 | D | 0.733 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.