Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26805 | 80638;80639;80640 | chr2:178565719;178565718;178565717 | chr2:179430446;179430445;179430444 |
N2AB | 25164 | 75715;75716;75717 | chr2:178565719;178565718;178565717 | chr2:179430446;179430445;179430444 |
N2A | 24237 | 72934;72935;72936 | chr2:178565719;178565718;178565717 | chr2:179430446;179430445;179430444 |
N2B | 17740 | 53443;53444;53445 | chr2:178565719;178565718;178565717 | chr2:179430446;179430445;179430444 |
Novex-1 | 17865 | 53818;53819;53820 | chr2:178565719;178565718;178565717 | chr2:179430446;179430445;179430444 |
Novex-2 | 17932 | 54019;54020;54021 | chr2:178565719;178565718;178565717 | chr2:179430446;179430445;179430444 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs370095455 | -0.033 | 0.064 | N | 0.411 | 0.223 | None | gnomAD-2.1.1 | 2.5E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 4.71E-05 | 1.40568E-04 |
E/A | rs370095455 | -0.033 | 0.064 | N | 0.411 | 0.223 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/A | rs370095455 | -0.033 | 0.064 | N | 0.411 | 0.223 | None | gnomAD-4.0.0 | 4.58638E-05 | None | None | None | None | N | None | 1.33558E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 6.01883E-05 | 0 | 3.20349E-05 |
E/Q | None | None | 0.47 | D | 0.419 | 0.254 | 0.298056030225 | gnomAD-4.0.0 | 6.00162E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1663 | likely_benign | 0.1659 | benign | -0.358 | Destabilizing | 0.064 | N | 0.411 | neutral | N | 0.47030364 | None | None | N |
E/C | 0.8581 | likely_pathogenic | 0.8695 | pathogenic | -0.006 | Destabilizing | 0.973 | D | 0.449 | neutral | None | None | None | None | N |
E/D | 0.1231 | likely_benign | 0.1183 | benign | -0.281 | Destabilizing | None | N | 0.113 | neutral | N | 0.488505398 | None | None | N |
E/F | 0.7521 | likely_pathogenic | 0.7561 | pathogenic | -0.364 | Destabilizing | 0.946 | D | 0.402 | neutral | None | None | None | None | N |
E/G | 0.2389 | likely_benign | 0.2241 | benign | -0.54 | Destabilizing | 0.003 | N | 0.269 | neutral | N | 0.474637695 | None | None | N |
E/H | 0.5626 | ambiguous | 0.564 | pathogenic | -0.161 | Destabilizing | 0.926 | D | 0.362 | neutral | None | None | None | None | N |
E/I | 0.2478 | likely_benign | 0.2681 | benign | 0.081 | Stabilizing | 0.73 | D | 0.423 | neutral | None | None | None | None | N |
E/K | 0.2137 | likely_benign | 0.2054 | benign | 0.19 | Stabilizing | 0.38 | N | 0.458 | neutral | N | 0.484694302 | None | None | N |
E/L | 0.315 | likely_benign | 0.3207 | benign | 0.081 | Stabilizing | 0.73 | D | 0.414 | neutral | None | None | None | None | N |
E/M | 0.4183 | ambiguous | 0.4249 | ambiguous | 0.188 | Stabilizing | 0.847 | D | 0.417 | neutral | None | None | None | None | N |
E/N | 0.3079 | likely_benign | 0.3021 | benign | 0.066 | Stabilizing | 0.081 | N | 0.405 | neutral | None | None | None | None | N |
E/P | 0.5431 | ambiguous | 0.5768 | pathogenic | -0.045 | Destabilizing | 0.287 | N | 0.387 | neutral | None | None | None | None | N |
E/Q | 0.1725 | likely_benign | 0.1735 | benign | 0.082 | Stabilizing | 0.47 | N | 0.419 | neutral | D | 0.522964689 | None | None | N |
E/R | 0.3385 | likely_benign | 0.3413 | ambiguous | 0.378 | Stabilizing | 0.852 | D | 0.371 | neutral | None | None | None | None | N |
E/S | 0.2183 | likely_benign | 0.2226 | benign | -0.135 | Destabilizing | 0.305 | N | 0.406 | neutral | None | None | None | None | N |
E/T | 0.2372 | likely_benign | 0.2455 | benign | 0.003 | Stabilizing | 0.377 | N | 0.428 | neutral | None | None | None | None | N |
E/V | 0.1677 | likely_benign | 0.1823 | benign | -0.045 | Destabilizing | 0.591 | D | 0.417 | neutral | N | 0.504725645 | None | None | N |
E/W | 0.9041 | likely_pathogenic | 0.9072 | pathogenic | -0.267 | Destabilizing | 0.994 | D | 0.516 | neutral | None | None | None | None | N |
E/Y | 0.6644 | likely_pathogenic | 0.6593 | pathogenic | -0.142 | Destabilizing | 0.979 | D | 0.415 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.