Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26826 | 80701;80702;80703 | chr2:178565656;178565655;178565654 | chr2:179430383;179430382;179430381 |
N2AB | 25185 | 75778;75779;75780 | chr2:178565656;178565655;178565654 | chr2:179430383;179430382;179430381 |
N2A | 24258 | 72997;72998;72999 | chr2:178565656;178565655;178565654 | chr2:179430383;179430382;179430381 |
N2B | 17761 | 53506;53507;53508 | chr2:178565656;178565655;178565654 | chr2:179430383;179430382;179430381 |
Novex-1 | 17886 | 53881;53882;53883 | chr2:178565656;178565655;178565654 | chr2:179430383;179430382;179430381 |
Novex-2 | 17953 | 54082;54083;54084 | chr2:178565656;178565655;178565654 | chr2:179430383;179430382;179430381 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1318267898 | 0.426 | 0.006 | N | 0.207 | 0.072 | 0.110078149338 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
K/N | rs1318267898 | 0.426 | 0.006 | N | 0.207 | 0.072 | 0.110078149338 | gnomAD-4.0.0 | 5.47424E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19656E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2647 | likely_benign | 0.2153 | benign | 0.08 | Stabilizing | 0.339 | N | 0.369 | neutral | None | None | None | None | I |
K/C | 0.5796 | likely_pathogenic | 0.5609 | ambiguous | -0.245 | Destabilizing | 0.995 | D | 0.298 | neutral | None | None | None | None | I |
K/D | 0.3726 | ambiguous | 0.2996 | benign | -0.005 | Destabilizing | 0.008 | N | 0.237 | neutral | None | None | None | None | I |
K/E | 0.163 | likely_benign | 0.1288 | benign | -0.002 | Destabilizing | 0.003 | N | 0.11 | neutral | N | 0.344856986 | None | None | I |
K/F | 0.6494 | likely_pathogenic | 0.5815 | pathogenic | -0.17 | Destabilizing | 0.955 | D | 0.303 | neutral | None | None | None | None | I |
K/G | 0.3467 | ambiguous | 0.3042 | benign | -0.092 | Destabilizing | 0.339 | N | 0.3 | neutral | None | None | None | None | I |
K/H | 0.2252 | likely_benign | 0.2093 | benign | -0.25 | Destabilizing | 0.783 | D | 0.294 | neutral | None | None | None | None | I |
K/I | 0.2573 | likely_benign | 0.213 | benign | 0.452 | Stabilizing | 0.282 | N | 0.324 | neutral | N | 0.471074431 | None | None | I |
K/L | 0.2978 | likely_benign | 0.251 | benign | 0.452 | Stabilizing | 0.068 | N | 0.353 | neutral | None | None | None | None | I |
K/M | 0.1779 | likely_benign | 0.1454 | benign | 0.109 | Stabilizing | 0.96 | D | 0.303 | neutral | None | None | None | None | I |
K/N | 0.2418 | likely_benign | 0.1857 | benign | 0.217 | Stabilizing | 0.006 | N | 0.207 | neutral | N | 0.441482243 | None | None | I |
K/P | 0.7131 | likely_pathogenic | 0.6754 | pathogenic | 0.354 | Stabilizing | 0.834 | D | 0.344 | neutral | None | None | None | None | I |
K/Q | 0.114 | likely_benign | 0.1016 | benign | 0.077 | Stabilizing | 0.185 | N | 0.293 | neutral | N | 0.407735028 | None | None | I |
K/R | 0.0867 | likely_benign | 0.085 | benign | 0.023 | Stabilizing | 0.258 | N | 0.293 | neutral | N | 0.400635698 | None | None | I |
K/S | 0.2938 | likely_benign | 0.2358 | benign | -0.212 | Destabilizing | 0.088 | N | 0.194 | neutral | None | None | None | None | I |
K/T | 0.126 | likely_benign | 0.1031 | benign | -0.072 | Destabilizing | 0.22 | N | 0.343 | neutral | N | 0.423973917 | None | None | I |
K/V | 0.2431 | likely_benign | 0.207 | benign | 0.354 | Stabilizing | 0.163 | N | 0.337 | neutral | None | None | None | None | I |
K/W | 0.6723 | likely_pathogenic | 0.6521 | pathogenic | -0.242 | Destabilizing | 0.997 | D | 0.375 | neutral | None | None | None | None | I |
K/Y | 0.4688 | ambiguous | 0.4247 | ambiguous | 0.119 | Stabilizing | 0.715 | D | 0.303 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.