Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26848 | 80767;80768;80769 | chr2:178565590;178565589;178565588 | chr2:179430317;179430316;179430315 |
N2AB | 25207 | 75844;75845;75846 | chr2:178565590;178565589;178565588 | chr2:179430317;179430316;179430315 |
N2A | 24280 | 73063;73064;73065 | chr2:178565590;178565589;178565588 | chr2:179430317;179430316;179430315 |
N2B | 17783 | 53572;53573;53574 | chr2:178565590;178565589;178565588 | chr2:179430317;179430316;179430315 |
Novex-1 | 17908 | 53947;53948;53949 | chr2:178565590;178565589;178565588 | chr2:179430317;179430316;179430315 |
Novex-2 | 17975 | 54148;54149;54150 | chr2:178565590;178565589;178565588 | chr2:179430317;179430316;179430315 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs898433512 | None | 0.991 | N | 0.615 | 0.319 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs898433512 | None | 0.991 | N | 0.615 | 0.319 | None | gnomAD-4.0.0 | 1.31494E-05 | None | None | None | None | N | None | 4.82556E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2626 | likely_benign | 0.2838 | benign | -0.82 | Destabilizing | 0.861 | D | 0.555 | neutral | N | 0.467965424 | None | None | N |
E/C | 0.9316 | likely_pathogenic | 0.9393 | pathogenic | -0.577 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
E/D | 0.3969 | ambiguous | 0.4247 | ambiguous | -1.135 | Destabilizing | 0.005 | N | 0.297 | neutral | N | 0.469927207 | None | None | N |
E/F | 0.9197 | likely_pathogenic | 0.9281 | pathogenic | -0.052 | Destabilizing | 0.995 | D | 0.79 | deleterious | None | None | None | None | N |
E/G | 0.4622 | ambiguous | 0.4813 | ambiguous | -1.225 | Destabilizing | 0.976 | D | 0.663 | neutral | N | 0.487159316 | None | None | N |
E/H | 0.8022 | likely_pathogenic | 0.8222 | pathogenic | -0.413 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
E/I | 0.4772 | ambiguous | 0.5114 | ambiguous | 0.302 | Stabilizing | 0.98 | D | 0.803 | deleterious | None | None | None | None | N |
E/K | 0.4761 | ambiguous | 0.4991 | ambiguous | -0.964 | Destabilizing | 0.958 | D | 0.504 | neutral | N | 0.471823792 | None | None | N |
E/L | 0.6455 | likely_pathogenic | 0.6756 | pathogenic | 0.302 | Stabilizing | 0.962 | D | 0.738 | prob.delet. | None | None | None | None | N |
E/M | 0.5984 | likely_pathogenic | 0.6345 | pathogenic | 0.728 | Stabilizing | 0.995 | D | 0.755 | deleterious | None | None | None | None | N |
E/N | 0.5828 | likely_pathogenic | 0.6047 | pathogenic | -1.411 | Destabilizing | 0.959 | D | 0.621 | neutral | None | None | None | None | N |
E/P | 0.7536 | likely_pathogenic | 0.803 | pathogenic | -0.051 | Destabilizing | 0.938 | D | 0.763 | deleterious | None | None | None | None | N |
E/Q | 0.273 | likely_benign | 0.2909 | benign | -1.217 | Destabilizing | 0.991 | D | 0.615 | neutral | N | 0.489756192 | None | None | N |
E/R | 0.6452 | likely_pathogenic | 0.6739 | pathogenic | -0.643 | Destabilizing | 0.991 | D | 0.659 | neutral | None | None | None | None | N |
E/S | 0.4118 | ambiguous | 0.4498 | ambiguous | -1.784 | Destabilizing | 0.891 | D | 0.475 | neutral | None | None | None | None | N |
E/T | 0.3535 | ambiguous | 0.3947 | ambiguous | -1.449 | Destabilizing | 0.141 | N | 0.375 | neutral | None | None | None | None | N |
E/V | 0.2972 | likely_benign | 0.3237 | benign | -0.051 | Destabilizing | 0.93 | D | 0.703 | prob.neutral | N | 0.473916906 | None | None | N |
E/W | 0.9742 | likely_pathogenic | 0.9743 | pathogenic | 0.175 | Stabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/Y | 0.8518 | likely_pathogenic | 0.8596 | pathogenic | 0.172 | Stabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.