Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26850 | 80773;80774;80775 | chr2:178565584;178565583;178565582 | chr2:179430311;179430310;179430309 |
N2AB | 25209 | 75850;75851;75852 | chr2:178565584;178565583;178565582 | chr2:179430311;179430310;179430309 |
N2A | 24282 | 73069;73070;73071 | chr2:178565584;178565583;178565582 | chr2:179430311;179430310;179430309 |
N2B | 17785 | 53578;53579;53580 | chr2:178565584;178565583;178565582 | chr2:179430311;179430310;179430309 |
Novex-1 | 17910 | 53953;53954;53955 | chr2:178565584;178565583;178565582 | chr2:179430311;179430310;179430309 |
Novex-2 | 17977 | 54154;54155;54156 | chr2:178565584;178565583;178565582 | chr2:179430311;179430310;179430309 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs1705482872 | None | None | N | 0.293 | 0.067 | 0.110078149338 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Q/H | rs1705482872 | None | None | N | 0.293 | 0.067 | 0.110078149338 | gnomAD-4.0.0 | 6.57436E-06 | None | None | None | None | N | None | 2.41324E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1941 | likely_benign | 0.1955 | benign | -0.962 | Destabilizing | 0.004 | N | 0.37 | neutral | None | None | None | None | N |
Q/C | 0.413 | ambiguous | 0.4475 | ambiguous | -0.432 | Destabilizing | 0.497 | N | 0.577 | neutral | None | None | None | None | N |
Q/D | 0.3644 | ambiguous | 0.35 | ambiguous | -2.098 | Highly Destabilizing | 0.018 | N | 0.456 | neutral | None | None | None | None | N |
Q/E | 0.0988 | likely_benign | 0.0872 | benign | -1.765 | Destabilizing | 0.003 | N | 0.358 | neutral | N | 0.41902667 | None | None | N |
Q/F | 0.4195 | ambiguous | 0.456 | ambiguous | -0.363 | Destabilizing | 0.044 | N | 0.558 | neutral | None | None | None | None | N |
Q/G | 0.2952 | likely_benign | 0.2905 | benign | -1.423 | Destabilizing | 0.009 | N | 0.459 | neutral | None | None | None | None | N |
Q/H | 0.1302 | likely_benign | 0.1436 | benign | -0.89 | Destabilizing | None | N | 0.293 | neutral | N | 0.46695669 | None | None | N |
Q/I | 0.2159 | likely_benign | 0.2223 | benign | 0.325 | Stabilizing | 0.009 | N | 0.499 | neutral | None | None | None | None | N |
Q/K | 0.1491 | likely_benign | 0.1338 | benign | -0.354 | Destabilizing | 0.003 | N | 0.377 | neutral | N | 0.438095221 | None | None | N |
Q/L | 0.0832 | likely_benign | 0.0852 | benign | 0.325 | Stabilizing | None | N | 0.385 | neutral | N | 0.419280174 | None | None | N |
Q/M | 0.2265 | likely_benign | 0.2406 | benign | 0.298 | Stabilizing | 0.002 | N | 0.321 | neutral | None | None | None | None | N |
Q/N | 0.1947 | likely_benign | 0.2162 | benign | -1.292 | Destabilizing | 0.009 | N | 0.459 | neutral | None | None | None | None | N |
Q/P | 0.6474 | likely_pathogenic | 0.6297 | pathogenic | -0.082 | Destabilizing | 0.065 | N | 0.549 | neutral | N | 0.479143919 | None | None | N |
Q/R | 0.1341 | likely_benign | 0.122 | benign | -0.641 | Destabilizing | None | N | 0.271 | neutral | N | 0.399115545 | None | None | N |
Q/S | 0.1574 | likely_benign | 0.186 | benign | -1.558 | Destabilizing | None | N | 0.252 | neutral | None | None | None | None | N |
Q/T | 0.1399 | likely_benign | 0.1431 | benign | -1.047 | Destabilizing | 0.009 | N | 0.408 | neutral | None | None | None | None | N |
Q/V | 0.1533 | likely_benign | 0.155 | benign | -0.082 | Destabilizing | 0.004 | N | 0.441 | neutral | None | None | None | None | N |
Q/W | 0.4121 | ambiguous | 0.4101 | ambiguous | -0.529 | Destabilizing | 0.788 | D | 0.576 | neutral | None | None | None | None | N |
Q/Y | 0.2491 | likely_benign | 0.2705 | benign | -0.07 | Destabilizing | 0.022 | N | 0.545 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.