Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26854 | 80785;80786;80787 | chr2:178565572;178565571;178565570 | chr2:179430299;179430298;179430297 |
N2AB | 25213 | 75862;75863;75864 | chr2:178565572;178565571;178565570 | chr2:179430299;179430298;179430297 |
N2A | 24286 | 73081;73082;73083 | chr2:178565572;178565571;178565570 | chr2:179430299;179430298;179430297 |
N2B | 17789 | 53590;53591;53592 | chr2:178565572;178565571;178565570 | chr2:179430299;179430298;179430297 |
Novex-1 | 17914 | 53965;53966;53967 | chr2:178565572;178565571;178565570 | chr2:179430299;179430298;179430297 |
Novex-2 | 17981 | 54166;54167;54168 | chr2:178565572;178565571;178565570 | chr2:179430299;179430298;179430297 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.302 | N | 0.481 | 0.238 | 0.239901079897 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/N | None | None | 0.512 | N | 0.546 | 0.157 | 0.0551355673512 | gnomAD-4.0.0 | 1.59163E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8592E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2124 | likely_benign | 0.1719 | benign | -1.256 | Destabilizing | 0.051 | N | 0.493 | neutral | None | None | None | None | N |
K/C | 0.3427 | ambiguous | 0.3057 | benign | -1.622 | Destabilizing | 0.968 | D | 0.621 | neutral | None | None | None | None | N |
K/D | 0.7717 | likely_pathogenic | 0.7037 | pathogenic | -1.971 | Destabilizing | 0.582 | D | 0.601 | neutral | None | None | None | None | N |
K/E | 0.2641 | likely_benign | 0.2082 | benign | -1.736 | Destabilizing | 0.302 | N | 0.481 | neutral | N | 0.480420912 | None | None | N |
K/F | 0.4959 | ambiguous | 0.4313 | ambiguous | -0.472 | Destabilizing | 0.004 | N | 0.525 | neutral | None | None | None | None | N |
K/G | 0.4825 | ambiguous | 0.4116 | ambiguous | -1.676 | Destabilizing | 0.365 | N | 0.573 | neutral | None | None | None | None | N |
K/H | 0.2444 | likely_benign | 0.2277 | benign | -2.005 | Highly Destabilizing | 0.968 | D | 0.592 | neutral | None | None | None | None | N |
K/I | 0.1561 | likely_benign | 0.1252 | benign | -0.093 | Destabilizing | 0.001 | N | 0.485 | neutral | None | None | None | None | N |
K/L | 0.201 | likely_benign | 0.1631 | benign | -0.093 | Destabilizing | 0.001 | N | 0.346 | neutral | None | None | None | None | N |
K/M | 0.0893 | likely_benign | 0.0719 | benign | -0.531 | Destabilizing | 0.039 | N | 0.471 | neutral | N | 0.50085862 | None | None | N |
K/N | 0.489 | ambiguous | 0.3856 | ambiguous | -1.967 | Destabilizing | 0.512 | D | 0.546 | neutral | N | 0.47691542 | None | None | N |
K/P | 0.9757 | likely_pathogenic | 0.9687 | pathogenic | -0.459 | Destabilizing | 0.738 | D | 0.601 | neutral | None | None | None | None | N |
K/Q | 0.1087 | likely_benign | 0.097 | benign | -1.655 | Destabilizing | 0.68 | D | 0.565 | neutral | N | 0.501623837 | None | None | N |
K/R | 0.0786 | likely_benign | 0.0737 | benign | -1.691 | Destabilizing | 0.68 | D | 0.524 | neutral | N | 0.390149345 | None | None | N |
K/S | 0.2712 | likely_benign | 0.218 | benign | -2.343 | Highly Destabilizing | 0.008 | N | 0.163 | neutral | None | None | None | None | N |
K/T | 0.1018 | likely_benign | 0.0747 | benign | -1.899 | Destabilizing | 0.178 | N | 0.535 | neutral | N | 0.468148769 | None | None | N |
K/V | 0.1593 | likely_benign | 0.1244 | benign | -0.459 | Destabilizing | 0.002 | N | 0.368 | neutral | None | None | None | None | N |
K/W | 0.5701 | likely_pathogenic | 0.5378 | ambiguous | -0.675 | Destabilizing | 0.991 | D | 0.642 | neutral | None | None | None | None | N |
K/Y | 0.409 | ambiguous | 0.3611 | ambiguous | -0.315 | Destabilizing | 0.41 | N | 0.61 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.