Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26858 | 80797;80798;80799 | chr2:178565560;178565559;178565558 | chr2:179430287;179430286;179430285 |
N2AB | 25217 | 75874;75875;75876 | chr2:178565560;178565559;178565558 | chr2:179430287;179430286;179430285 |
N2A | 24290 | 73093;73094;73095 | chr2:178565560;178565559;178565558 | chr2:179430287;179430286;179430285 |
N2B | 17793 | 53602;53603;53604 | chr2:178565560;178565559;178565558 | chr2:179430287;179430286;179430285 |
Novex-1 | 17918 | 53977;53978;53979 | chr2:178565560;178565559;178565558 | chr2:179430287;179430286;179430285 |
Novex-2 | 17985 | 54178;54179;54180 | chr2:178565560;178565559;178565558 | chr2:179430287;179430286;179430285 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.888 | N | 0.48 | 0.274 | 0.281780670237 | gnomAD-4.0.0 | 4.79003E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29699E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3737 | ambiguous | 0.3651 | ambiguous | -0.518 | Destabilizing | 0.678 | D | 0.477 | neutral | N | 0.414044925 | None | None | N |
E/C | 0.959 | likely_pathogenic | 0.9595 | pathogenic | -0.064 | Destabilizing | 0.996 | D | 0.661 | neutral | None | None | None | None | N |
E/D | 0.1844 | likely_benign | 0.1583 | benign | -0.4 | Destabilizing | 0.627 | D | 0.355 | neutral | N | 0.432516043 | None | None | N |
E/F | 0.9446 | likely_pathogenic | 0.9363 | pathogenic | -0.314 | Destabilizing | 0.948 | D | 0.613 | neutral | None | None | None | None | N |
E/G | 0.3894 | ambiguous | 0.3778 | ambiguous | -0.742 | Destabilizing | 0.98 | D | 0.469 | neutral | N | 0.486094238 | None | None | N |
E/H | 0.7865 | likely_pathogenic | 0.7815 | pathogenic | -0.191 | Destabilizing | 0.997 | D | 0.509 | neutral | None | None | None | None | N |
E/I | 0.6173 | likely_pathogenic | 0.6091 | pathogenic | 0.046 | Stabilizing | 0.017 | N | 0.54 | neutral | None | None | None | None | N |
E/K | 0.4024 | ambiguous | 0.4095 | ambiguous | 0.272 | Stabilizing | 0.888 | D | 0.48 | neutral | N | 0.417797306 | None | None | N |
E/L | 0.7047 | likely_pathogenic | 0.702 | pathogenic | 0.046 | Stabilizing | 0.294 | N | 0.518 | neutral | None | None | None | None | N |
E/M | 0.7579 | likely_pathogenic | 0.7525 | pathogenic | 0.229 | Stabilizing | 0.852 | D | 0.559 | neutral | None | None | None | None | N |
E/N | 0.5475 | ambiguous | 0.53 | ambiguous | -0.117 | Destabilizing | 0.961 | D | 0.518 | neutral | None | None | None | None | N |
E/P | 0.8438 | likely_pathogenic | 0.8481 | pathogenic | -0.122 | Destabilizing | 0.886 | D | 0.507 | neutral | None | None | None | None | N |
E/Q | 0.2948 | likely_benign | 0.3033 | benign | -0.067 | Destabilizing | 0.984 | D | 0.476 | neutral | N | 0.463935028 | None | None | N |
E/R | 0.5891 | likely_pathogenic | 0.5938 | pathogenic | 0.458 | Stabilizing | 0.991 | D | 0.516 | neutral | None | None | None | None | N |
E/S | 0.4288 | ambiguous | 0.4157 | ambiguous | -0.284 | Destabilizing | 0.85 | D | 0.486 | neutral | None | None | None | None | N |
E/T | 0.5383 | ambiguous | 0.5238 | ambiguous | -0.096 | Destabilizing | 0.931 | D | 0.477 | neutral | None | None | None | None | N |
E/V | 0.444 | ambiguous | 0.439 | ambiguous | -0.122 | Destabilizing | 0.183 | N | 0.459 | neutral | N | 0.445426625 | None | None | N |
E/W | 0.9803 | likely_pathogenic | 0.9754 | pathogenic | -0.116 | Destabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/Y | 0.8948 | likely_pathogenic | 0.8751 | pathogenic | -0.058 | Destabilizing | 0.99 | D | 0.569 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.