Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26867 | 80824;80825;80826 | chr2:178565533;178565532;178565531 | chr2:179430260;179430259;179430258 |
N2AB | 25226 | 75901;75902;75903 | chr2:178565533;178565532;178565531 | chr2:179430260;179430259;179430258 |
N2A | 24299 | 73120;73121;73122 | chr2:178565533;178565532;178565531 | chr2:179430260;179430259;179430258 |
N2B | 17802 | 53629;53630;53631 | chr2:178565533;178565532;178565531 | chr2:179430260;179430259;179430258 |
Novex-1 | 17927 | 54004;54005;54006 | chr2:178565533;178565532;178565531 | chr2:179430260;179430259;179430258 |
Novex-2 | 17994 | 54205;54206;54207 | chr2:178565533;178565532;178565531 | chr2:179430260;179430259;179430258 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/W | rs1038243734 | -1.688 | 1.0 | D | 0.849 | 0.693 | 0.821037014432 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
L/W | rs1038243734 | -1.688 | 1.0 | D | 0.849 | 0.693 | 0.821037014432 | gnomAD-4.0.0 | 1.59172E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85933E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6103 | likely_pathogenic | 0.5418 | ambiguous | -1.911 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
L/C | 0.8272 | likely_pathogenic | 0.7966 | pathogenic | -1.217 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
L/D | 0.9905 | likely_pathogenic | 0.9874 | pathogenic | -1.721 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/E | 0.9583 | likely_pathogenic | 0.9446 | pathogenic | -1.557 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/F | 0.6711 | likely_pathogenic | 0.5915 | pathogenic | -1.016 | Destabilizing | 1.0 | D | 0.79 | deleterious | N | 0.494869815 | None | None | N |
L/G | 0.9215 | likely_pathogenic | 0.8924 | pathogenic | -2.394 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
L/H | 0.9292 | likely_pathogenic | 0.9049 | pathogenic | -1.738 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/I | 0.2407 | likely_benign | 0.2091 | benign | -0.568 | Destabilizing | 0.995 | D | 0.725 | deleterious | None | None | None | None | N |
L/K | 0.9528 | likely_pathogenic | 0.9467 | pathogenic | -1.487 | Destabilizing | 0.999 | D | 0.88 | deleterious | None | None | None | None | N |
L/M | 0.3163 | likely_benign | 0.2826 | benign | -0.51 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.483348925 | None | None | N |
L/N | 0.9516 | likely_pathogenic | 0.9387 | pathogenic | -1.654 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/P | 0.819 | likely_pathogenic | 0.7338 | pathogenic | -0.99 | Destabilizing | 1.0 | D | 0.91 | deleterious | None | None | None | None | N |
L/Q | 0.8806 | likely_pathogenic | 0.8534 | pathogenic | -1.578 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
L/R | 0.9032 | likely_pathogenic | 0.8842 | pathogenic | -1.169 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
L/S | 0.8454 | likely_pathogenic | 0.7721 | pathogenic | -2.341 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | N | 0.480448863 | None | None | N |
L/T | 0.524 | ambiguous | 0.4187 | ambiguous | -2.034 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
L/V | 0.2647 | likely_benign | 0.2256 | benign | -0.99 | Destabilizing | 0.995 | D | 0.714 | prob.delet. | N | 0.518412592 | None | None | N |
L/W | 0.8614 | likely_pathogenic | 0.8237 | pathogenic | -1.319 | Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.527559606 | None | None | N |
L/Y | 0.9436 | likely_pathogenic | 0.9293 | pathogenic | -1.001 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.