Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26890 | 80893;80894;80895 | chr2:178565464;178565463;178565462 | chr2:179430191;179430190;179430189 |
N2AB | 25249 | 75970;75971;75972 | chr2:178565464;178565463;178565462 | chr2:179430191;179430190;179430189 |
N2A | 24322 | 73189;73190;73191 | chr2:178565464;178565463;178565462 | chr2:179430191;179430190;179430189 |
N2B | 17825 | 53698;53699;53700 | chr2:178565464;178565463;178565462 | chr2:179430191;179430190;179430189 |
Novex-1 | 17950 | 54073;54074;54075 | chr2:178565464;178565463;178565462 | chr2:179430191;179430190;179430189 |
Novex-2 | 18017 | 54274;54275;54276 | chr2:178565464;178565463;178565462 | chr2:179430191;179430190;179430189 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs766880487 | 0.155 | None | N | 0.164 | 0.125 | 0.162503812791 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.35E-05 | 0 |
S/N | rs766880487 | 0.155 | None | N | 0.164 | 0.125 | 0.162503812791 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
S/N | rs766880487 | 0.155 | None | N | 0.164 | 0.125 | 0.162503812791 | gnomAD-4.0.0 | 7.43908E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.01732E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1355 | likely_benign | 0.136 | benign | -0.298 | Destabilizing | 0.035 | N | 0.358 | neutral | None | None | None | None | I |
S/C | 0.1321 | likely_benign | 0.153 | benign | -0.293 | Destabilizing | 0.78 | D | 0.371 | neutral | N | 0.519245175 | None | None | I |
S/D | 0.8101 | likely_pathogenic | 0.8399 | pathogenic | 0.643 | Stabilizing | 0.081 | N | 0.264 | neutral | None | None | None | None | I |
S/E | 0.8794 | likely_pathogenic | 0.899 | pathogenic | 0.649 | Stabilizing | 0.149 | N | 0.263 | neutral | None | None | None | None | I |
S/F | 0.4334 | ambiguous | 0.4277 | ambiguous | -0.638 | Destabilizing | 0.555 | D | 0.44 | neutral | None | None | None | None | I |
S/G | 0.149 | likely_benign | 0.1728 | benign | -0.513 | Destabilizing | 0.027 | N | 0.277 | neutral | N | 0.503089476 | None | None | I |
S/H | 0.4926 | ambiguous | 0.5424 | ambiguous | -0.78 | Destabilizing | 0.555 | D | 0.357 | neutral | None | None | None | None | I |
S/I | 0.2758 | likely_benign | 0.2945 | benign | 0.158 | Stabilizing | 0.188 | N | 0.431 | neutral | N | 0.506507661 | None | None | I |
S/K | 0.9248 | likely_pathogenic | 0.9449 | pathogenic | -0.076 | Destabilizing | 0.149 | N | 0.261 | neutral | None | None | None | None | I |
S/L | 0.1871 | likely_benign | 0.1812 | benign | 0.158 | Stabilizing | 0.081 | N | 0.379 | neutral | None | None | None | None | I |
S/M | 0.2755 | likely_benign | 0.2531 | benign | -0.031 | Destabilizing | 0.824 | D | 0.358 | neutral | None | None | None | None | I |
S/N | 0.1654 | likely_benign | 0.1783 | benign | -0.14 | Destabilizing | None | N | 0.164 | neutral | N | 0.498618897 | None | None | I |
S/P | 0.6676 | likely_pathogenic | 0.6585 | pathogenic | 0.039 | Stabilizing | 0.555 | D | 0.36 | neutral | None | None | None | None | I |
S/Q | 0.7288 | likely_pathogenic | 0.7666 | pathogenic | -0.154 | Destabilizing | 0.555 | D | 0.307 | neutral | None | None | None | None | I |
S/R | 0.8873 | likely_pathogenic | 0.9111 | pathogenic | -0.058 | Destabilizing | 0.317 | N | 0.349 | neutral | N | 0.510566687 | None | None | I |
S/T | 0.0934 | likely_benign | 0.0853 | benign | -0.185 | Destabilizing | None | N | 0.164 | neutral | N | 0.448208719 | None | None | I |
S/V | 0.2676 | likely_benign | 0.2732 | benign | 0.039 | Stabilizing | 0.081 | N | 0.429 | neutral | None | None | None | None | I |
S/W | 0.6347 | likely_pathogenic | 0.6489 | pathogenic | -0.715 | Destabilizing | 0.935 | D | 0.561 | neutral | None | None | None | None | I |
S/Y | 0.3337 | likely_benign | 0.3593 | ambiguous | -0.35 | Destabilizing | 0.555 | D | 0.439 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.