Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26910 | 80953;80954;80955 | chr2:178565404;178565403;178565402 | chr2:179430131;179430130;179430129 |
N2AB | 25269 | 76030;76031;76032 | chr2:178565404;178565403;178565402 | chr2:179430131;179430130;179430129 |
N2A | 24342 | 73249;73250;73251 | chr2:178565404;178565403;178565402 | chr2:179430131;179430130;179430129 |
N2B | 17845 | 53758;53759;53760 | chr2:178565404;178565403;178565402 | chr2:179430131;179430130;179430129 |
Novex-1 | 17970 | 54133;54134;54135 | chr2:178565404;178565403;178565402 | chr2:179430131;179430130;179430129 |
Novex-2 | 18037 | 54334;54335;54336 | chr2:178565404;178565403;178565402 | chr2:179430131;179430130;179430129 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1456879074 | 0.126 | 0.003 | N | 0.213 | 0.148 | 0.136095386433 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/D | rs1456879074 | 0.126 | 0.003 | N | 0.213 | 0.148 | 0.136095386433 | gnomAD-4.0.0 | 1.59173E-06 | None | None | None | None | I | None | 0 | 2.28676E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.0692 | likely_benign | 0.0733 | benign | -0.382 | Destabilizing | None | N | 0.21 | neutral | None | None | None | None | I |
N/C | 0.1333 | likely_benign | 0.142 | benign | 0.31 | Stabilizing | 0.245 | N | 0.512 | neutral | None | None | None | None | I |
N/D | 0.1102 | likely_benign | 0.104 | benign | 0.019 | Stabilizing | 0.003 | N | 0.213 | neutral | N | 0.433124623 | None | None | I |
N/E | 0.1328 | likely_benign | 0.1336 | benign | -0.011 | Destabilizing | None | N | 0.091 | neutral | None | None | None | None | I |
N/F | 0.2613 | likely_benign | 0.2743 | benign | -0.705 | Destabilizing | 0.085 | N | 0.584 | neutral | None | None | None | None | I |
N/G | 0.1307 | likely_benign | 0.1296 | benign | -0.567 | Destabilizing | 0.002 | N | 0.205 | neutral | None | None | None | None | I |
N/H | 0.0685 | likely_benign | 0.0691 | benign | -0.603 | Destabilizing | 0.196 | N | 0.378 | neutral | N | 0.471144294 | None | None | I |
N/I | 0.0849 | likely_benign | 0.0863 | benign | 0.023 | Stabilizing | 0.007 | N | 0.483 | neutral | N | 0.455790839 | None | None | I |
N/K | 0.08 | likely_benign | 0.0796 | benign | 0.031 | Stabilizing | None | N | 0.079 | neutral | N | 0.366072912 | None | None | I |
N/L | 0.0931 | likely_benign | 0.0979 | benign | 0.023 | Stabilizing | 0.004 | N | 0.298 | neutral | None | None | None | None | I |
N/M | 0.1362 | likely_benign | 0.1401 | benign | 0.371 | Stabilizing | 0.245 | N | 0.521 | neutral | None | None | None | None | I |
N/P | 0.5372 | ambiguous | 0.5348 | ambiguous | -0.085 | Destabilizing | 0.037 | N | 0.416 | neutral | None | None | None | None | I |
N/Q | 0.104 | likely_benign | 0.1053 | benign | -0.443 | Destabilizing | 0.009 | N | 0.236 | neutral | None | None | None | None | I |
N/R | 0.0993 | likely_benign | 0.1052 | benign | 0.078 | Stabilizing | 0.004 | N | 0.215 | neutral | None | None | None | None | I |
N/S | 0.0545 | likely_benign | 0.0554 | benign | -0.201 | Destabilizing | None | N | 0.085 | neutral | N | 0.394219518 | None | None | I |
N/T | 0.0535 | likely_benign | 0.0568 | benign | -0.085 | Destabilizing | None | N | 0.079 | neutral | N | 0.341907973 | None | None | I |
N/V | 0.0731 | likely_benign | 0.0754 | benign | -0.085 | Destabilizing | 0.004 | N | 0.303 | neutral | None | None | None | None | I |
N/W | 0.5408 | ambiguous | 0.5607 | ambiguous | -0.668 | Destabilizing | 0.788 | D | 0.501 | neutral | None | None | None | None | I |
N/Y | 0.1165 | likely_benign | 0.1196 | benign | -0.413 | Destabilizing | 0.065 | N | 0.572 | neutral | N | 0.512164197 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.