Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2692 | 8299;8300;8301 | chr2:178771253;178771252;178771251 | chr2:179635980;179635979;179635978 |
N2AB | 2692 | 8299;8300;8301 | chr2:178771253;178771252;178771251 | chr2:179635980;179635979;179635978 |
N2A | 2692 | 8299;8300;8301 | chr2:178771253;178771252;178771251 | chr2:179635980;179635979;179635978 |
N2B | 2646 | 8161;8162;8163 | chr2:178771253;178771252;178771251 | chr2:179635980;179635979;179635978 |
Novex-1 | 2646 | 8161;8162;8163 | chr2:178771253;178771252;178771251 | chr2:179635980;179635979;179635978 |
Novex-2 | 2646 | 8161;8162;8163 | chr2:178771253;178771252;178771251 | chr2:179635980;179635979;179635978 |
Novex-3 | 2692 | 8299;8300;8301 | chr2:178771253;178771252;178771251 | chr2:179635980;179635979;179635978 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.175 | N | 0.449 | 0.154 | 0.166414681773 | gnomAD-4.0.0 | 8.20914E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.89234E-06 | 0 | 1.65574E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2459 | likely_benign | 0.2827 | benign | -0.925 | Destabilizing | 0.055 | N | 0.389 | neutral | None | None | None | None | N |
K/C | 0.5777 | likely_pathogenic | 0.5941 | pathogenic | -0.992 | Destabilizing | 0.958 | D | 0.507 | neutral | None | None | None | None | N |
K/D | 0.4965 | ambiguous | 0.5301 | ambiguous | -0.3 | Destabilizing | 0.055 | N | 0.455 | neutral | None | None | None | None | N |
K/E | 0.1054 | likely_benign | 0.12 | benign | -0.134 | Destabilizing | None | N | 0.213 | neutral | N | 0.443152398 | None | None | N |
K/F | 0.6534 | likely_pathogenic | 0.6844 | pathogenic | -0.459 | Destabilizing | 0.859 | D | 0.522 | neutral | None | None | None | None | N |
K/G | 0.435 | ambiguous | 0.4887 | ambiguous | -1.335 | Destabilizing | None | N | 0.414 | neutral | None | None | None | None | N |
K/H | 0.2295 | likely_benign | 0.2397 | benign | -1.557 | Destabilizing | 0.497 | N | 0.519 | neutral | None | None | None | None | N |
K/I | 0.2041 | likely_benign | 0.2224 | benign | 0.167 | Stabilizing | 0.667 | D | 0.569 | neutral | None | None | None | None | N |
K/L | 0.2384 | likely_benign | 0.2557 | benign | 0.167 | Stabilizing | 0.22 | N | 0.51 | neutral | None | None | None | None | N |
K/M | 0.1487 | likely_benign | 0.1609 | benign | -0.022 | Destabilizing | 0.602 | D | 0.517 | neutral | N | 0.512950813 | None | None | N |
K/N | 0.2915 | likely_benign | 0.3281 | benign | -0.798 | Destabilizing | 0.175 | N | 0.449 | neutral | N | 0.511214043 | None | None | N |
K/P | 0.9573 | likely_pathogenic | 0.9576 | pathogenic | -0.169 | Destabilizing | 0.364 | N | 0.534 | neutral | None | None | None | None | N |
K/Q | 0.0875 | likely_benign | 0.0973 | benign | -0.791 | Destabilizing | None | N | 0.194 | neutral | N | 0.440183691 | None | None | N |
K/R | 0.0777 | likely_benign | 0.0784 | benign | -0.733 | Destabilizing | 0.001 | N | 0.179 | neutral | N | 0.484837895 | None | None | N |
K/S | 0.2873 | likely_benign | 0.3228 | benign | -1.546 | Destabilizing | 0.055 | N | 0.41 | neutral | None | None | None | None | N |
K/T | 0.0996 | likely_benign | 0.113 | benign | -1.15 | Destabilizing | 0.175 | N | 0.489 | neutral | N | 0.503351756 | None | None | N |
K/V | 0.1948 | likely_benign | 0.2148 | benign | -0.169 | Destabilizing | 0.22 | N | 0.53 | neutral | None | None | None | None | N |
K/W | 0.6745 | likely_pathogenic | 0.6976 | pathogenic | -0.298 | Destabilizing | 0.958 | D | 0.506 | neutral | None | None | None | None | N |
K/Y | 0.5277 | ambiguous | 0.5429 | ambiguous | None | Stabilizing | 0.667 | D | 0.559 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.