Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26923 | 80992;80993;80994 | chr2:178565365;178565364;178565363 | chr2:179430092;179430091;179430090 |
N2AB | 25282 | 76069;76070;76071 | chr2:178565365;178565364;178565363 | chr2:179430092;179430091;179430090 |
N2A | 24355 | 73288;73289;73290 | chr2:178565365;178565364;178565363 | chr2:179430092;179430091;179430090 |
N2B | 17858 | 53797;53798;53799 | chr2:178565365;178565364;178565363 | chr2:179430092;179430091;179430090 |
Novex-1 | 17983 | 54172;54173;54174 | chr2:178565365;178565364;178565363 | chr2:179430092;179430091;179430090 |
Novex-2 | 18050 | 54373;54374;54375 | chr2:178565365;178565364;178565363 | chr2:179430092;179430091;179430090 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.988 | N | 0.652 | 0.428 | 0.402326594622 | gnomAD-4.0.0 | 1.36857E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51991E-05 | None | 0 | 0 | 8.99549E-07 | 0 | 0 |
T/K | rs2154164717 | None | 0.988 | N | 0.625 | 0.427 | 0.355865052028 | gnomAD-4.0.0 | 6.84284E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15955E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.6798 | likely_pathogenic | 0.6105 | pathogenic | -0.35 | Destabilizing | 0.067 | N | 0.284 | neutral | N | 0.460274017 | None | None | N |
T/C | 0.9584 | likely_pathogenic | 0.9467 | pathogenic | -0.182 | Destabilizing | 0.999 | D | 0.658 | neutral | None | None | None | None | N |
T/D | 0.8094 | likely_pathogenic | 0.7588 | pathogenic | -0.011 | Destabilizing | 0.995 | D | 0.655 | neutral | None | None | None | None | N |
T/E | 0.9242 | likely_pathogenic | 0.8974 | pathogenic | -0.095 | Destabilizing | 0.991 | D | 0.633 | neutral | None | None | None | None | N |
T/F | 0.9411 | likely_pathogenic | 0.9276 | pathogenic | -0.847 | Destabilizing | 0.995 | D | 0.726 | prob.delet. | None | None | None | None | N |
T/G | 0.6736 | likely_pathogenic | 0.6385 | pathogenic | -0.477 | Destabilizing | 0.938 | D | 0.567 | neutral | None | None | None | None | N |
T/H | 0.8487 | likely_pathogenic | 0.8209 | pathogenic | -0.816 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
T/I | 0.9503 | likely_pathogenic | 0.9312 | pathogenic | -0.136 | Destabilizing | 0.988 | D | 0.652 | neutral | N | 0.477430447 | None | None | N |
T/K | 0.8447 | likely_pathogenic | 0.8278 | pathogenic | -0.415 | Destabilizing | 0.988 | D | 0.625 | neutral | N | 0.457298276 | None | None | N |
T/L | 0.7047 | likely_pathogenic | 0.6603 | pathogenic | -0.136 | Destabilizing | 0.938 | D | 0.508 | neutral | None | None | None | None | N |
T/M | 0.458 | ambiguous | 0.3885 | ambiguous | 0.125 | Stabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
T/N | 0.4352 | ambiguous | 0.379 | ambiguous | -0.151 | Destabilizing | 0.995 | D | 0.645 | neutral | None | None | None | None | N |
T/P | 0.8958 | likely_pathogenic | 0.8768 | pathogenic | -0.179 | Destabilizing | 0.994 | D | 0.644 | neutral | N | 0.458565723 | None | None | N |
T/Q | 0.8583 | likely_pathogenic | 0.8303 | pathogenic | -0.419 | Destabilizing | 0.995 | D | 0.665 | neutral | None | None | None | None | N |
T/R | 0.8418 | likely_pathogenic | 0.8208 | pathogenic | -0.115 | Destabilizing | 0.994 | D | 0.633 | neutral | N | 0.467528945 | None | None | N |
T/S | 0.409 | ambiguous | 0.3555 | ambiguous | -0.337 | Destabilizing | 0.919 | D | 0.421 | neutral | N | 0.444775185 | None | None | N |
T/V | 0.8751 | likely_pathogenic | 0.8396 | pathogenic | -0.179 | Destabilizing | 0.938 | D | 0.46 | neutral | None | None | None | None | N |
T/W | 0.9798 | likely_pathogenic | 0.9751 | pathogenic | -0.854 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
T/Y | 0.9145 | likely_pathogenic | 0.9044 | pathogenic | -0.578 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.