Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 26938 | 81037;81038;81039 | chr2:178565320;178565319;178565318 | chr2:179430047;179430046;179430045 |
N2AB | 25297 | 76114;76115;76116 | chr2:178565320;178565319;178565318 | chr2:179430047;179430046;179430045 |
N2A | 24370 | 73333;73334;73335 | chr2:178565320;178565319;178565318 | chr2:179430047;179430046;179430045 |
N2B | 17873 | 53842;53843;53844 | chr2:178565320;178565319;178565318 | chr2:179430047;179430046;179430045 |
Novex-1 | 17998 | 54217;54218;54219 | chr2:178565320;178565319;178565318 | chr2:179430047;179430046;179430045 |
Novex-2 | 18065 | 54418;54419;54420 | chr2:178565320;178565319;178565318 | chr2:179430047;179430046;179430045 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | None | None | 0.917 | D | 0.533 | 0.384 | 0.380052290102 | gnomAD-4.0.0 | 1.59155E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77331E-05 | None | 0 | 0 | 0 | 0 | 0 |
H/Q | rs1173826868 | -0.499 | 0.642 | N | 0.397 | 0.197 | 0.206339911435 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
H/Q | rs1173826868 | -0.499 | 0.642 | N | 0.397 | 0.197 | 0.206339911435 | gnomAD-4.0.0 | 6.84268E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99548E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.272 | likely_benign | 0.2531 | benign | -1.384 | Destabilizing | 0.3 | N | 0.374 | neutral | None | None | None | None | N |
H/C | 0.1285 | likely_benign | 0.1207 | benign | -0.635 | Destabilizing | 0.007 | N | 0.387 | neutral | None | None | None | None | N |
H/D | 0.3231 | likely_benign | 0.2916 | benign | -1.261 | Destabilizing | 0.784 | D | 0.491 | neutral | N | 0.464794325 | None | None | N |
H/E | 0.3289 | likely_benign | 0.295 | benign | -1.117 | Destabilizing | 0.495 | N | 0.332 | neutral | None | None | None | None | N |
H/F | 0.2303 | likely_benign | 0.224 | benign | 0.26 | Stabilizing | 0.007 | N | 0.231 | neutral | None | None | None | None | N |
H/G | 0.356 | ambiguous | 0.3193 | benign | -1.758 | Destabilizing | 0.665 | D | 0.418 | neutral | None | None | None | None | N |
H/I | 0.1784 | likely_benign | 0.1701 | benign | -0.306 | Destabilizing | 0.329 | N | 0.429 | neutral | None | None | None | None | N |
H/K | 0.2157 | likely_benign | 0.2057 | benign | -1.242 | Destabilizing | 0.013 | N | 0.232 | neutral | None | None | None | None | N |
H/L | 0.1015 | likely_benign | 0.0935 | benign | -0.306 | Destabilizing | 0.139 | N | 0.39 | neutral | N | 0.42002204 | None | None | N |
H/M | 0.3343 | likely_benign | 0.3201 | benign | -0.499 | Destabilizing | 0.944 | D | 0.493 | neutral | None | None | None | None | N |
H/N | 0.1015 | likely_benign | 0.1003 | benign | -1.455 | Destabilizing | 0.784 | D | 0.363 | neutral | N | 0.443514975 | None | None | N |
H/P | 0.7943 | likely_pathogenic | 0.7296 | pathogenic | -0.651 | Destabilizing | 0.917 | D | 0.533 | neutral | D | 0.527093577 | None | None | N |
H/Q | 0.1508 | likely_benign | 0.1418 | benign | -1.075 | Destabilizing | 0.642 | D | 0.397 | neutral | N | 0.404823301 | None | None | N |
H/R | 0.0984 | likely_benign | 0.0939 | benign | -1.699 | Destabilizing | 0.473 | N | 0.367 | neutral | N | 0.404551155 | None | None | N |
H/S | 0.1884 | likely_benign | 0.1747 | benign | -1.494 | Destabilizing | 0.329 | N | 0.411 | neutral | None | None | None | None | N |
H/T | 0.173 | likely_benign | 0.1637 | benign | -1.254 | Destabilizing | 0.013 | N | 0.318 | neutral | None | None | None | None | N |
H/V | 0.1561 | likely_benign | 0.1507 | benign | -0.651 | Destabilizing | 0.013 | N | 0.41 | neutral | None | None | None | None | N |
H/W | 0.297 | likely_benign | 0.2811 | benign | 0.589 | Stabilizing | 0.981 | D | 0.486 | neutral | None | None | None | None | N |
H/Y | 0.0925 | likely_benign | 0.0897 | benign | 0.537 | Stabilizing | 0.01 | N | 0.163 | neutral | N | 0.432105903 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.